haiku.rag/docs/mcp.md
Yiorgis Gozadinos 110adf23ee
Make toc.json item_range the line slice it documents
build_toc stored item positions, while the sandbox instructions describe
item_range as a slice into items.jsonl; a gap in positions pulled the next
heading into a section. Ranges are now indices into the position-ordered
items, and get_document_section slices by index too. docs/mcp.md names the
tools that take sources.
2026-09-07 10:27:02 +03:00

6.8 KiB

Model Context Protocol (MCP)

The MCP server exposes haiku.rag as MCP tools for compatible MCP clients like Claude Desktop.

Starting MCP Server

The MCP server supports Streamable HTTP and stdio transports:

# Default streamable HTTP transport on 127.0.0.1:8001
haiku-rag mcp

# Custom port
haiku-rag mcp --port 9000

# Bind to all interfaces (e.g. inside a container)
haiku-rag mcp --host 0.0.0.0 --port 8001

# stdio transport (for Claude Desktop)
haiku-rag mcp --stdio

--host defaults to 127.0.0.1 (loopback only). Bind to 0.0.0.0 only when you want the MCP server reachable from outside the local machine — e.g. inside a Docker container with port mapping, or on a trusted LAN.

The server opens the database read-only. Ingestion goes through the CLI (haiku-rag add, add-src, delete) or haiku-ingester.

Collections

With several databases in lancedb.databases, the server covers all of them, as haiku-rag search does. Results, documents and citations name theirs in source. sources on search_documents, search_documents_by_image and execute_code restricts a call to a subset; source on get_document names the database holding the document. A name the server does not cover is an error. haiku-rag --db-name NAME mcp serves one. See Multiple Databases.

Claude Code

The repository ships a plugin that registers the server and a skill telling Claude when and how to use it:

claude plugin marketplace add ggozad/haiku.rag
claude plugin install haiku-rag

The plugin runs haiku-rag mcp --stdio, so haiku-rag must be on the PATH and the configuration decides the database. The skill pre-approves every tool and is also invocable as /haiku-rag. To register the server without the plugin:

claude mcp add haiku-rag -- haiku-rag mcp --stdio

The skill works with that registration too: copy claude-plugin/skills/haiku-rag into ~/.claude/skills/ and change the tool prefix in its allowed-tools from mcp__plugin_haiku-rag_haiku-rag__ to mcp__haiku-rag__.

Claude Desktop Integration

Add to your Claude Desktop configuration (claude_desktop_config.json):

{
  "mcpServers": {
    "haiku-rag": {
      "command": "haiku-rag",
      "args": ["mcp", "--stdio"]
    }
  }
}

With a custom database path:

{
  "mcpServers": {
    "haiku-rag": {
      "command": "haiku-rag",
      "args": ["mcp", "--stdio", "--db", "/path/to/database.lancedb"]
    }
  }
}

After restarting Claude Desktop, you can ask Claude to search your documents or answer questions using your knowledge base.

Tools

Every tool is read-only and says so in its annotations. Each parameter carries a description in the tool schema, so the listing below names them without repeating it.

Tool Registered Parameters
search_documents always query, limit, include_images, filter, sources
search_documents_by_image multimodal embedder only image_base64, limit, include_images, filter, sources
get_document always document_id, source
get_document_outline always document_id, source
get_document_section always document_id, section_id, source
list_documents always limit, offset, filter
execute_code always code, filter, sources

search_documents runs hybrid search, vector and full-text. Its text content is the rendering the in-process agents read: results best first, each with its rank, Document ID, Collection when the server covers several, the document title, section headings, the matched chunk's metadata when it has any, and the passage expanded to its section the way the agents get it (search.max_context_chars caps it). Pictures in the results follow as image blocks, one per distinct picture, each preceded by a line naming its result; include_images: false leaves them out. Search results carry no structured content, so every client shows the model the same text and images. Scores are not comparable across queries or search types, so rank is the signal. search_documents_by_image embeds the query image and searches by vector similarity alone.

get_document returns a document whole, in reading order. For a long one, get_document_outline returns the heading tree with page numbers and get_document_section the text of one section, subsections included; a node's id in the outline is the section_id. A document without headings has an empty outline. list_documents returns titles, URIs and metadata, which is how a client learns what a filter can match.

execute_code runs a Python program in the sandbox of the analysis capability, over the documents filter and sources select, and returns what it printed. The program reads /documents/{document_id}/ (metadata.json, content.txt, items.jsonl, chunks.jsonl, toc.json) and can await search() and await list_documents(); the tool description spells out the fields and the interpreter's limits. Each call is one program: nothing carries over between calls, and the sandbox is created and closed per call. A failing program is a tool error carrying the interpreter's message and any output printed before it. analysis.code_timeout bounds a call and analysis.max_output_chars its output; no model runs on the server. Claude Code moves a call still running after about two minutes to a background task.

Filters

filter is a SQL WHERE clause over the document columns id, uri, title, metadata, created_at, updated_at. metadata is a JSON string, so match its keys with LIKE:

metadata LIKE '%"author": "Smith"%'
uri LIKE '%.pdf'
title = 'Q3 report'

Errors

A failure is an MCP error, never an empty result. Expected failures carry a message: a document or section id that matches nothing, a collection the server does not cover, a filter the query engine rejects (with its message), invalid base64, and a program that fails in execute_code. A failure on the server inside a program, a database read or an in-code search raising, reaches the program and the client as its exception type only; the traceback goes to the server log. Anything else reaches the client as Error calling tool 'name' and its traceback goes to the server log.

Instructions

The server publishes instructions describing the knowledge base: what it holds, when to reach for it, the collection names when it covers several, and prompts.domain_preamble when set. Claude Code shows them to the model. Claude Desktop does not, so every tool description stands on its own.

Continuous ingestion

For continuous document ingestion (filesystem watch, S3 polling, HTTP sources, a job queue with retries), run haiku-ingester as a separate process against the same LanceDB.