Commit graph

1869 commits

Author SHA1 Message Date
Yiorgis Gozadinos
a2def043cc
Merge pull request #421 from ggozad/fix/read-only-update
Read operations no longer modify the database
2026-06-05 11:46:46 +03:00
Yiorgis Gozadinos
abefdcdd41
Test vector_dim mismatch raises in read-only mode 2026-06-05 10:55:38 +03:00
Yiorgis Gozadinos
414be551fb
Open read CLI verbs read-only 2026-06-05 10:48:49 +03:00
Yiorgis Gozadinos
0e3d53791f
Add rebuild --set-embedder to reconcile embedder identity 2026-06-05 10:42:15 +03:00
Yiorgis Gozadinos
213569601b
Stop rewriting stored embedding settings on database open 2026-06-05 10:35:50 +03:00
Yiorgis Gozadinos
b6bbea3d64
Stop writing the schema version on database open 2026-06-05 10:32:30 +03:00
Yiorgis Gozadinos
e70f271ac7
vb 2026-06-04 14:13:55 +03:00
Yiorgis Gozadinos
c688871b61
Merge pull request #418 from ggozad/feat/ingester-postgres-queue
Support a database server for the ingester queue (SQLite + Postgres)
2026-06-04 14:07:14 +03:00
Yiorgis Gozadinos
e2e0a8dc1b
Cover the Postgres queue construction paths in CI 2026-06-04 12:21:47 +03:00
Yiorgis Gozadinos
73e8ac2dd6
Build the SQLite queue URL without reparsing the path 2026-06-04 12:14:27 +03:00
Yiorgis Gozadinos
a04dc9445b
Pre-ping the Postgres queue engine 2026-06-04 11:29:31 +03:00
Yiorgis Gozadinos
e37d764ab2
Add a docker-compose for integration test services 2026-06-04 11:13:16 +03:00
Yiorgis Gozadinos
1717bd4996
Make the SQLite job claim atomic across processes 2026-06-03 16:57:57 +03:00
Yiorgis Gozadinos
5cc32f111e
Mask the dburi password in queue init/migrate output 2026-06-03 14:42:32 +03:00
Yiorgis Gozadinos
a3cc13230f
test the Postgres queue and document dburi 2026-06-03 14:34:09 +03:00
Yiorgis Gozadinos
44089e5b1f
Support a dburi for the ingester queue (SQLite + Postgres)
Migrate the ingester queue storage from raw aiosqlite to SQLAlchemy Core
async. The backend is chosen by ingester.queue.dburi: a SQLAlchemy async
URL points the queue at a database server, and SQLite remains the default
when unset. The Postgres path claims jobs with FOR UPDATE SKIP LOCKED so
multiple ingester processes can share one queue; SQLite caps the pool to a
single connection to keep the select-then-update claim atomic.
2026-06-03 14:34:09 +03:00
Yiorgis Gozadinos
4eae86225e
vb 2026-06-03 14:26:58 +03:00
Yiorgis Gozadinos
0b58e6dc14
Merge pull request #417 from ggozad/fix/atomic-rename-race
skip spurious ingester DELETE when the resource is back on its source
2026-06-03 14:17:51 +03:00
Yiorgis Gozadinos
8afdd46176
skip spurious ingester DELETE when the resource is back on its source 2026-06-03 14:05:53 +03:00
Yiorgis Gozadinos
5b879aa6ed
Merge pull request #416 from ggozad/fix/rebuild-embed-images
Fix rebuild --embed-only corrupting picture embeddings
2026-06-03 13:49:04 +03:00
Yiorgis Gozadinos
a65757807e
Use cached HuggingFace models offline in test job
The Qwen tokenizer and cross-encoder pre-downloads call the HF metadata
API to revalidate even on a cache hit; a 429 there propagates instead of
falling back to the cached files, failing CI on HF throttling.

Skip the pre-download steps when the cache is restored and run pytest
with HF_HUB_OFFLINE/TRANSFORMERS_OFFLINE on a hit, so cached models are
used without any network revalidation; allow online on a miss so a fresh
cache key still populates. Rename the cache key so the snapshot
re-populates with every test model (the old key predated the
cross-encoder step and never cached it).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-03 12:11:33 +03:00
Yiorgis Gozadinos
651b22ddcf
Fix rebuild --embed-only corrupting picture embeddings 2026-06-03 11:46:43 +03:00
Yiorgis Gozadinos
6d95fbe74a
Merge pull request #414 from ggozad/feat/prune-ingestor-pool
Add retention window to ingester queue
2026-06-03 11:06:44 +03:00
Yiorgis Gozadinos
a423a6dd9c
authenticate HuggingFace downloads in test job 2026-06-03 10:57:45 +03:00
Yiorgis Gozadinos
46747d369a
Add retention window to ingester queue, prune terminal job rows past retention window 2026-06-03 10:38:58 +03:00
Yiorgis Gozadinos
83b7e37855
Merge pull request #413 from ggozad/feat/analysis-citation-improvement
Improve citation rate for analysis skill in lesser models (gemma4)
2026-06-03 10:03:54 +03:00
Yiorgis Gozadinos
4ff17a84bb
Update benchmarks 2026-06-02 15:20:17 +03:00
Yiorgis Gozadinos
eb74525084
Lift analysis-skill citation rate via SKILL.md tightening 2026-06-01 18:58:52 +03:00
Yiorgis Gozadinos
8dbcd4bd7a
vb, changelog 2026-06-01 18:54:22 +03:00
Yiorgis Gozadinos
0550e363d4
Merge pull request #394 from mcdonc/perf/max-file-size-validation
perf: add configurable max_file_size to prevent OOM on large files
2026-06-01 18:49:18 +03:00
Chris McDonough
7e4aa8c71f
Add configurable max_file_size to reject oversized files before ingestion
Large files buffered entirely in RAM can OOM workers. Add
max_file_size to source config (default None = no limit).

FS checks stat().st_size before read_bytes(). HTTP and WebDAV issue
a HEAD request before GET when a limit is configured. S3 checks the
size from the existing head_async() call before get_async().

FileTooLargeError is classified as PermanentError so oversized files
go straight to the DLQ instead of retrying.
2026-06-01 18:40:46 +03:00
Yiorgis Gozadinos
774ac7c350
Merge pull request #393 from mcdonc/perf/batch-sync-state-writes
perf: batch sync_state writes during poller sweeps
2026-06-01 18:33:40 +03:00
Yiorgis Gozadinos
249d6c85c5
Merge pull request #401 from mcdonc/fix/revisionless-server-re-ingestion
fix: stop constant re-ingestion when server provides no revision header
2026-06-01 18:25:51 +03:00
Yiorgis Gozadinos
2cd97880fd
Replace sync_state batch 5-tuple with a SyncRow NamedTuple 2026-06-01 18:25:15 +03:00
Chris McDonough
a0a247d18a
Batch sync_state writes during poller sweeps
Each discovered file previously triggered a separate sync.upsert()
call with its own lock acquire + SQLite commit (fsync). On a sweep
finding 1,000 files this meant 1,000 individual commits.

Collect sync_state rows into a list during the sweep and flush them
in a single SyncStateRepo.batch_upsert() call at the end — one lock
acquisition, one commit, one fsync.
2026-06-01 18:21:09 +03:00
Chris McDonough
8deac2fee8
Fix constant re-ingestion when server provides no revision header
HTTP, S3, and WebDAV sources all check `revision is not None and
snapshot.get(uri) == revision` to decide UPSERT vs UNCHANGED.  When
a server returns no ETag or Last-Modified, revision is None and the
condition always fails — every sweep emits UPSERT even though the
content hasn't changed.

Now emit UNCHANGED when revision is None and the URI is already
known (has been ingested before).  A first-time discovery with no
revision still correctly emits UPSERT.
2026-06-01 18:14:27 +03:00
Yiorgis Gozadinos
20634376a3
Merge pull request #411 from mcdonc/chore/coverage-gaps
chore: close coverage gaps in cli, filter, registry, and migrations
2026-06-01 18:12:22 +03:00
Yiorgis Gozadinos
c0faf5ecf3
Merge pull request #408 from mcdonc/fix/directory-errors-permanent
fix: classify IsADirectoryError and NotADirectoryError as PermanentError
2026-06-01 18:07:24 +03:00
Yiorgis Gozadinos
734a1d8f0e
Merge pull request #407 from mcdonc/fix/http-discover-silent-exception
fix: narrow HTTP discover() exception catch to TransportError
2026-06-01 18:06:46 +03:00
Yiorgis Gozadinos
c1932e22e5
Strengthen config-load assertions 2026-06-01 18:03:09 +03:00
Chris McDonough
1bf2505093
Improve test coverage for cli, filter, registry, and migrations
These files were not touched by the recent performance and
correctness PRs but had coverage gaps. Adds tests for:

- CLI: serve, queue init/migrate, config loading, cli() entry point
  including MigrationRequiredError exit path
- filter: _default_supported_extensions, __call__ watchfiles callback,
  FileFilter with supported_extensions=None
- registry: resolve_adhoc_fetcher with bucket-less S3 URI
- migrations: pragma no-cover on unreachable schema upgrade path
  (no diff migrations exist until SCHEMA_VERSION > 1)
2026-06-01 18:00:47 +03:00
Chris McDonough
adf03284ff
Classify IsADirectoryError and NotADirectoryError as PermanentError
Both are OSError subclasses caught by the broad timeout/io handler
and classified as transient. Pointing at a directory instead of a
file or a broken path component will never succeed on retry.
2026-06-01 17:59:23 +03:00
Chris McDonough
61ea22527a
Narrow HTTP discover() exception catch to TransportError only
The bare `except Exception` in HTTPSource.discover() silently
swallowed all errors from HEAD requests — including configuration
errors (bad auth, invalid headers) and programming errors (TypeError,
AttributeError) — treating them identically to network failures by
emitting UPSERT with no revision.

Narrow the catch to httpx.TransportError (the umbrella for
ConnectError, TimeoutException, etc.) and add a debug log. Other
exceptions now propagate to the poller's circuit breaker where they
surface as failures instead of being silently retried forever.
2026-06-01 17:57:51 +03:00
Yiorgis Gozadinos
64f2b7b7d2
Merge pull request #405 from mcdonc/fix/run-batch-hang-on-dead-workers
fix: run_batch hangs forever when all workers die
2026-06-01 17:51:49 +03:00
Yiorgis Gozadinos
49cb6e7591
Merge pull request #409 from mcdonc/fix/sync-state-write-crash
fix: sync_state write failure after mark_succeeded should not crash worker
2026-06-01 17:46:46 +03:00
Yiorgis Gozadinos
e9875fc842
Merge pull request #395 from mcdonc/perf/reuse-httpx-clients
perf: reuse httpx.AsyncClient in HTTP and WebDAV sources
2026-06-01 17:38:05 +03:00
Yiorgis Gozadinos
c5814b31bf
Test source clients close after the worker pool stops
Workers share the pollers' Source instances for fetch(), so the httpx
clients must be closed only after the pool has stopped. Guards both
run_batch() and serve() against reintroducing the shutdown-order bug.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 17:29:53 +03:00
Yiorgis Gozadinos
e3ea207358
Merge pull request #396 from mcdonc/perf/stagger-periodic-polls
perf: stagger periodic poll sweeps to avoid thundering herd
2026-06-01 17:23:22 +03:00
Yiorgis Gozadinos
b79bbcaed4
Merge pull request #399 from mcdonc/fix/discover-stat-race
fix: handle file deleted during discover() stat() call
2026-06-01 17:18:47 +03:00
Yiorgis Gozadinos
fda798a746
Merge pull request #391 from mcdonc/perf/event-driven-worker-wakeup
perf: event-driven worker wakeup via asyncio.Condition
2026-06-01 17:06:40 +03:00