pediatric-ai-scribe-v3/server.js
Daniel 46112e1221
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feat: connect Nextcloud by signing in to Nextcloud
Asking someone to find Settings → Security → Create new app password is a poor
first run, and it is the step people give up on. Nextcloud has its own answer:
Login Flow v2. The person enters their server address, signs in on Nextcloud the
way they normally do — SSO, 2FA, a password manager — and Nextcloud generates an
app password for this app. We never see their real password.

Pasting an app password still works, behind "Use an app password instead". It is
the fallback, not the front door.

The security of this is all in what is trusted. The remote server chooses both
the login URL and the poll endpoint, so both are SSRF-checked and both must be
on the host the person actually typed — an endpoint pointing elsewhere would
make this a request-forgery gadget aimed at whatever it named. The server
Nextcloud reports at the end is re-checked before it is stored. The poll token
is a credential, so polling happens server-side and the browser holds only an
opaque handle bound to its own account.

Flows live in memory with a 20 minute life, matching Nextcloud's own expiry: a
login lasts minutes, and a restart mid-flow is a retry rather than a loss.
Starting a second flow replaces the first, which is what clicking again means.

The tab is opened from the click itself, before the request — opening it after
an await is what a popup blocker stops.

Removed with Learning Hub: the WebDAV browse path. Its field, its route and its
column are gone, since nothing browses Nextcloud any more. nextcloud_folder is a
different column and still in use.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
2026-09-12 20:55:00 +02:00

428 lines
20 KiB
JavaScript

require('dotenv').config();
const { version: APP_VERSION } = require('./package.json');
const express = require('express');
const cors = require('cors');
const helmet = require('helmet');
const rateLimit = require('express-rate-limit');
const cookieParser = require('cookie-parser');
const path = require('path');
const http = require('http');
const loggingMiddleware = require('./src/middleware/logging');
const { metricsHandler, metricsMiddleware } = require('./src/utils/metrics');
const app = express();
const server = http.createServer(app);
// Trust first proxy (Nginx/Caddy) — required for correct client IP in rate limiting and audit logs
app.set('trust proxy', 1);
// ============================================================
// SECURITY — Helmet with CSP
// ============================================================
app.use(helmet({
crossOriginEmbedderPolicy: false,
hsts: { maxAge: 31536000, includeSubDomains: true, preload: true },
contentSecurityPolicy: {
directives: {
defaultSrc: ["'self'"],
scriptSrc: ["'self'", 'https://cdn.jsdelivr.net', 'https://cdnjs.cloudflare.com', 'https://challenges.cloudflare.com'],
scriptSrcAttr: ["'none'"],
styleSrc: ["'self'", "'unsafe-inline'", 'https://fonts.googleapis.com', 'https://cdnjs.cloudflare.com'],
fontSrc: ["'self'", 'https://fonts.gstatic.com', 'https://cdnjs.cloudflare.com'],
imgSrc: ["'self'", 'data:', 'blob:'],
mediaSrc: ["'self'", 'blob:'],
connectSrc: ["'self'", 'https://cdnjs.cloudflare.com', 'https://fonts.googleapis.com', 'https://fonts.gstatic.com', 'https://www.google.com', 'wss://www.google.com', 'https://clinicaltables.nlm.nih.gov',
// Cloudflare Turnstile
'https://challenges.cloudflare.com'],
workerSrc: ["'self'", 'blob:'],
childSrc: ["'self'", 'blob:'],
frameSrc: ["'self'", 'https://challenges.cloudflare.com'],
objectSrc: ["'none'"],
// Disable helmet's default upgrade-insecure-requests so tests can hit
// the container over plain HTTP. In production, Caddy terminates TLS
// and serves HTTPS — mixed-content is a non-issue there.
upgradeInsecureRequests: null,
}
}
}));
// ============================================================
// CORS — restrict to APP_URL origin in production
// ============================================================
var allowedOrigins = [];
if (process.env.APP_URL) allowedOrigins.push(process.env.APP_URL.replace(/\/$/, ''));
if (process.env.CORS_ORIGINS) process.env.CORS_ORIGINS.split(',').forEach(function(o) { allowedOrigins.push(o.trim().replace(/\/$/, '')); });
var IS_PROD = process.env.NODE_ENV === 'production' || !!process.env.APP_URL;
if (IS_PROD && allowedOrigins.length === 0) {
console.error('[FATAL] Production mode but no APP_URL or CORS_ORIGINS set. Refusing to run with open CORS.');
process.exit(1);
}
// Scoped to /api only — static assets (including type="module" scripts which
// always send an Origin header) must not be subject to CORS checks.
app.use('/api', cors({
origin: function(origin, callback) {
// Allow requests with no origin (mobile apps, curl, server-to-server)
if (!origin) return callback(null, true);
// Development only: if no origins configured, allow all
if (!IS_PROD && allowedOrigins.length === 0) return callback(null, true);
if (allowedOrigins.indexOf(origin) !== -1) return callback(null, true);
callback(new Error('CORS: origin not allowed'));
},
credentials: true,
exposedHeaders: ['X-TTS-Provider']
}));
app.use(cookieParser());
app.use(metricsMiddleware);
// ============================================================
// BODY LIMITS — 10mb for JSON (chart review with many notes can be large),
// transcribe uses multipart (25mb limit set in multer)
// ============================================================
app.use(express.json({ limit: '10mb' }));
// ============================================================
// RATE LIMITING
// ============================================================
// General API: 200 req/min default; configurable so the e2e container
// can raise it without weakening production.
app.use('/api/', rateLimit({
windowMs: 60000,
max: parseInt(process.env.API_RATE_LIMIT_MAX || '200', 10),
message: { error: 'Too many requests' },
standardHeaders: true, legacyHeaders: false
}));
// Auth routes: 10 attempts/15min per IP (brute-force protection).
// LOGIN_RATE_LIMIT_MAX env var lets the e2e container raise it to a
// level that accommodates multi-worker Playwright runs without
// weakening production.
app.use('/api/auth/login', rateLimit({
windowMs: 15 * 60 * 1000,
max: parseInt(process.env.LOGIN_RATE_LIMIT_MAX || '10', 10),
message: { error: 'Too many login attempts. Try again in 15 minutes.' },
standardHeaders: true, legacyHeaders: false
}));
// Asking for a code sends mail to someone else's address, so it is limited more
// tightly than a login attempt: the cost of abuse lands on the mailbox owner.
// Note these are separate limiters rather than covered by the one above —
// Express matches app.use paths on segment boundaries, so '/api/auth/login'
// does not match '/api/auth/login-code'.
app.use('/api/auth/login-code/request', rateLimit({
windowMs: 60 * 60 * 1000,
max: parseInt(process.env.LOGIN_CODE_RATE_LIMIT_MAX || '5', 10),
message: { error: 'Too many code requests. Try again later, or sign in with your password.' },
standardHeaders: true, legacyHeaders: false
}));
app.use('/api/auth/login-code/verify', rateLimit({
windowMs: 15 * 60 * 1000,
max: parseInt(process.env.LOGIN_RATE_LIMIT_MAX || '10', 10),
message: { error: 'Too many attempts. Try again in 15 minutes.' },
standardHeaders: true, legacyHeaders: false
}));
app.use('/api/auth/register', rateLimit({
windowMs: 60 * 60 * 1000, max: 5,
message: { error: 'Too many registration attempts.' },
standardHeaders: true, legacyHeaders: false
}));
app.use('/api/auth/forgot-password', rateLimit({
windowMs: 60 * 60 * 1000, max: 5,
message: { error: 'Too many password reset attempts.' },
standardHeaders: true, legacyHeaders: false
}));
app.use('/api/auth/resend-verification', rateLimit({
windowMs: 15 * 60 * 1000, max: 3,
message: { error: 'Too many verification requests. Try again in 15 minutes.' },
standardHeaders: true, legacyHeaders: false
}));
// Post-login sensitive endpoints — protect against brute force with a stolen cookie.
// Keyed per-IP; 20 attempts / 15 min covers legitimate use, blocks TOTP brute force (10^6 space).
var sensitiveAuthLimiter = rateLimit({
windowMs: 15 * 60 * 1000, max: 20,
message: { error: 'Too many attempts. Try again in 15 minutes.' },
standardHeaders: true, legacyHeaders: false
});
app.use('/api/auth/change-password', sensitiveAuthLimiter);
app.use('/api/auth/setup-2fa', sensitiveAuthLimiter);
app.use('/api/auth/verify-2fa', sensitiveAuthLimiter);
app.use('/api/auth/disable-2fa', sensitiveAuthLimiter);
// Serve .well-known/assetlinks.json for TWA verification (must be before static)
app.get('/.well-known/assetlinks.json', (req, res) => {
res.setHeader('Content-Type', 'application/json');
res.setHeader('Cache-Control', 'public, max-age=86400');
res.sendFile(path.join(__dirname, 'public', '.well-known', 'assetlinks.json'));
});
// ============================================================
// CACHE-BUSTING VERSION STAMP
// ============================================================
// Use the full source revision for asset cache busting and /api/build.
// Unversioned development builds are explicitly "unknown", never random SHAs.
var fs = require('fs');
var BUILD_ID = require('./src/utils/buildId').getBuildId(__dirname);
console.log('🔖 Build ID:', BUILD_ID);
// Template index.html on each request if the file changed (mtime-based).
// Avoids a stale in-memory copy after static edits / script additions while
// still being essentially free — just an fs.stat per request, zero template
// rebuild when mtime hasn't changed.
var INDEX_PATH = path.join(__dirname, 'public', 'index.html');
var _indexCached = { mtime: 0, html: null };
function getTemplatedIndex() {
try {
var st = fs.statSync(INDEX_PATH);
if (st.mtimeMs === _indexCached.mtime && _indexCached.html) return _indexCached.html;
var raw = fs.readFileSync(INDEX_PATH, 'utf8');
_indexCached.html = raw.replace(
/(<(?:script|link)[^>]+(?:src|href)=["'])(\/(?:js|css)\/[^"'?]+)(?:\?v=[^"']*)?(["'])/g,
'$1$2?v=' + BUILD_ID + '$3'
);
_indexCached.mtime = st.mtimeMs;
return _indexCached.html;
} catch (e) {
console.warn('[build-id] index.html read failed:', e.message);
return null;
}
}
// Prime once at boot so first request is fast
getTemplatedIndex();
app.get(['/', '/index.html', '/assistant'], function(req, res) {
var html = getTemplatedIndex();
if (!html) return res.sendFile(INDEX_PATH);
res.setHeader('Content-Type', 'text/html; charset=utf-8');
res.setHeader('Cache-Control', 'no-cache, no-store, must-revalidate');
res.setHeader('X-Build-Id', BUILD_ID);
res.send(html);
});
// Public endpoint for cache-bust debugging + build-info
app.get('/api/build', function(req, res) { res.json({ buildId: BUILD_ID }); });
// Registers the citation-quality counters at boot. Without this they appear
// only after the first answer, so a fresh Grafana panel reads "no data"
// instead of zero — which looks like broken wiring rather than a quiet day.
require('./src/utils/citationAudit');
// Metrics are for Prometheus, which scrapes pediatric-ai-scribe:3000 directly
// over the Docker network. Served unguarded, this endpoint answered on every
// public hostname: 201 lines naming routes, traffic volumes, event-loop timings
// and process internals to anyone who asked. Nothing here is a credential, but
// it is a free map of the application for someone probing it.
//
// A request that arrived through the reverse proxy carries X-Forwarded-For;
// one from a container on our own network does not. That is the distinction
// that matters here, and it does not depend on getting a CIDR list right.
// METRICS_TOKEN allows an explicit override for scraping from elsewhere.
app.get('/metrics', function (req, res, next) {
var token = process.env.METRICS_TOKEN;
if (token && req.get('authorization') === 'Bearer ' + token) return next();
if (req.get('x-forwarded-for')) return res.status(404).end();
return next();
}, metricsHandler);
app.use(loggingMiddleware);
app.use('/vendor/dompurify', express.static(path.join(__dirname, 'node_modules', 'dompurify', 'dist'), {
setHeaders: function(res) {
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}));
app.use('/vendor/markdown-it', express.static(path.join(__dirname, 'node_modules', 'markdown-it', 'dist'), {
setHeaders: function(res) {
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}));
app.use('/vendor/marked', express.static(path.join(__dirname, 'node_modules', 'marked', 'lib'), {
setHeaders: function(res) {
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}));
app.use('/vendor/katex', express.static(path.join(__dirname, 'node_modules', 'katex', 'dist'), {
setHeaders: function(res) {
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}));
app.use('/vendor/mathjax', express.static(path.join(__dirname, 'node_modules', 'mathjax-full', 'es5'), {
setHeaders: function(res) {
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}));
app.use(express.static(path.join(__dirname, 'public'), {
setHeaders: (res, filePath) => {
if (filePath.endsWith('.html')) {
// Never cache HTML — ensures new deployments are picked up immediately
res.setHeader('Cache-Control', 'no-cache, no-store, must-revalidate');
res.setHeader('Pragma', 'no-cache');
res.setHeader('Expires', '0');
} else if (filePath.match(/\.(js|css)$/)) {
// Short cache for JS/CSS — 1 hour
res.setHeader('Cache-Control', 'public, max-age=3600');
} else if (filePath.indexOf('/components/') !== -1) {
// Component HTML — 1 hour cache
res.setHeader('Cache-Control', 'public, max-age=3600');
}
}
}));
// Routes
app.use('/api/auth', require('./src/routes/auth'));
app.use('/api/auth', require('./src/routes/oidc'));
// Config exposes only its authenticated announcement before its own admin guard.
app.use('/api/admin', require('./src/routes/adminConfig'));
app.use('/api/admin', require('./src/routes/admin'));
app.use('/api/admin', require('./src/routes/adminMilestones'));
app.use('/api/admin/docs', require('./src/routes/adminDocs'));
// Public endpoints — must come BEFORE any router that applies authMiddleware to /api/*
const { getAvailableModels, activeProvider: modelsProvider } = require('./src/utils/models');
app.get('/api/models', async (req, res) => {
try {
var { getAvailableModelsWithOverrides, getEffectiveDefaultModel } = require('./src/utils/models');
var db = require('./src/db/database');
var models = await getAvailableModelsWithOverrides(db);
var defaultModel = await getEffectiveDefaultModel(db, models);
res.json({ models: models, provider: modelsProvider, defaultModel: defaultModel });
} catch(e) {
res.status(503).json({ models: [], provider: modelsProvider, defaultModel: '', error: 'Model policy unavailable' });
}
});
const { activeProvider } = require('./src/utils/ai');
// Public health: minimal — just confirm the server is up.
app.get('/api/health', (req, res) => {
res.json({ ok: true });
});
// Detailed health: admin-only — exposes which providers are configured.
const { authMiddleware: _hcAuth, adminMiddleware: _hcAdmin } = require('./src/middleware/auth');
app.get('/api/health/detailed', _hcAuth, _hcAdmin, (req, res) => {
res.json({
status: 'running', version: APP_VERSION, provider: activeProvider,
timestamp: new Date().toISOString(),
openrouter: process.env.OPENROUTER_API_KEY ? 'configured' : 'missing',
bedrock: process.env.AWS_BEDROCK_REGION ? 'configured' : 'not configured',
azure: process.env.AZURE_OPENAI_ENDPOINT ? 'configured' : 'not configured',
litellm: process.env.LITELLM_API_BASE ? 'configured' : 'not configured',
// Asked of the same functions the routes ask, so this cannot drift from what
// speech actually does. It used to answer from environment variables of its
// own and would report tts: 'elevenlabs' for a provider that does not exist
// in this app — a health check that lies is worse than one that is absent.
stt: require('./src/utils/sttProvider').getSTTProvider(),
tts: require('./src/utils/ttsProvider').getTTSProvider()
});
});
// Learning Hub routes (all authenticated users can read content & take quizzes)
// A person's own generated teaching material. Separate from Learning, which is
// moderator-owned and published; this is private to whoever made it.
app.use('/api', require('./src/routes/myResources'));
// Authenticated feature routes
app.use('/api', require('./src/routes/transcribe'));
app.use('/api', require('./src/routes/hpi'));
app.use('/api', require('./src/routes/hospitalCourse'));
app.use('/api', require('./src/routes/chartReview'));
app.use('/api', require('./src/routes/milestones'));
app.use('/api', require('./src/routes/peGuide'));
app.use('/api', require('./src/routes/extensions'));
app.use('/api', require('./src/routes/soap'));
app.use('/api', require('./src/routes/tts'));
app.use('/api', require('./src/routes/nextcloud'));
app.use('/api', require('./src/routes/refine'));
app.use('/api', require('./src/routes/logs'));
app.use('/api', require('./src/routes/encounters'));
app.use('/api', require('./src/routes/memories'));
app.use('/api', require('./src/routes/notes'));
app.use('/api', require('./src/routes/diagrams'));
app.use('/api', require('./src/routes/clinicalAssistant'));
app.use('/api', require('./src/routes/generatedImages'));
var imageWorker = require('./src/utils/generatedImages').service();
imageWorker.start();
app.use('/api', require('./src/routes/documents'));
app.use('/api', require('./src/routes/audioBackups'));
app.use('/api', require('./src/routes/billing'));
app.use('/api/sessions', require('./src/routes/sessions'));
app.use('/api', require('./src/routes/wellVisit'));
app.use('/api', require('./src/routes/sickVisit'));
app.use('/api', require('./src/routes/edEncounters'));
app.use('/api', require('./src/routes/dontMiss'));
app.use('/api', require('./src/routes/patientEducation'));
app.use('/api/user', require('./src/routes/userPreferences'));
app.get('/', (req, res) => {
res.setHeader('Cache-Control', 'no-cache, no-store, must-revalidate');
res.setHeader('Pragma', 'no-cache');
res.setHeader('Expires', '0');
res.sendFile(path.join(__dirname, 'public', 'index.html'));
});
// 404 handler — must be last
app.use((req, res) => {
res.status(404).sendFile(path.join(__dirname, 'public', '404.html'));
});
// Load prompt DB overrides after DB is ready (3s grace period)
const PROMPTS = require('./src/utils/prompts');
const db = require('./src/db/database');
setTimeout(() => { PROMPTS.loadFromDb(db); }, 3000);
const PORT = process.env.PORT || 3000;
server.listen(PORT, () => {
console.log('');
console.log('==========================================');
console.log('🏥 PEDIATRIC AI SCRIBE v' + APP_VERSION);
console.log('==========================================');
console.log('🌐 http://localhost:' + PORT);
console.log('🤖 Provider: ' + activeProvider);
console.log('==========================================');
});
// Graceful shutdown — drain in-flight requests (including note writes)
// before Docker kills us. Without this, a `docker restart` mid-save
// truncates the write. Express accepts SIGTERM immediately by default.
var shuttingDown = false;
function shutdown(signal) {
if (shuttingDown) return;
shuttingDown = true;
console.log('[' + signal + '] starting graceful shutdown…');
var imageWorkerStopped = imageWorker.stop();
// Stop accepting new connections; finish the ones already in-flight.
server.close(async function(err) {
if (err) console.error('[shutdown] server.close error:', err.message);
console.log('[shutdown] HTTP server closed.');
// Drain batched audit/api/access log queues before the DB pool ends.
try {
var queues = require('./src/utils/auditQueue');
if (queues && typeof queues.drainAll === 'function') {
await queues.drainAll();
console.log('[shutdown] Audit queues flushed.');
}
} catch (e) { console.error('[shutdown] audit drain:', e.message); }
// Stop image claims and abort/drain the active worker before closing its DB.
await imageWorkerStopped;
// Close the Postgres pool so pending queries finish/reject cleanly.
try {
var dbMod = require('./src/db/database');
// Clear the hourly cleanup interval first — otherwise its handle
// keeps the event loop alive past process.exit(0) and Docker
// ends up SIGKILL'ing us mid-shutdown at the 10s hard limit.
if (dbMod && dbMod._cleanupInterval) clearInterval(dbMod._cleanupInterval);
if (dbMod && dbMod.pool && typeof dbMod.pool.end === 'function') {
await dbMod.pool.end();
console.log('[shutdown] DB pool drained.');
}
} catch (e) {}
// Shared corpus client belongs to the app, not to individual user logouts.
// Data drainage above takes priority; the existing hard deadline still applies.
try { await require('./src/utils/clinicalMcpClient').closeMcpSession(); }
catch (e) { console.error('[shutdown] MCP cleanup incomplete'); }
process.exit(0);
});
// Hard deadline — Docker sends SIGKILL after 10s by default, so beat it
// to the punch with a clean exit if we're still hanging.
setTimeout(function() {
console.error('[shutdown] forcing exit after 9s');
process.exit(1);
}, 9000).unref();
}
process.on('SIGTERM', function() { shutdown('SIGTERM'); });
process.on('SIGINT', function() { shutdown('SIGINT'); });