Commit graph

40 commits

Author SHA1 Message Date
Daniel
8f49c4dcb9 feat(mobile): biometric sign-in (Face ID / Touch ID / fingerprint)
Adds opt-in biometric login to the Capacitor app. Replaces the password
step on subsequent sign-ins; the 2FA step (if any) still applies — by
design, defense in depth.

How it works:
- After a successful password sign-in on a Capacitor build, prompt the
  user to enroll. If they accept, capacitor-native-biometric.setCredentials
  stores the (email, password) pair in the iOS Keychain / Android Keystore
  with biometric-protected access. The local flag ped_bio_enabled=1 is
  set so the next launch knows to probe.
- On the login form, if isNativeApp() + bioStored() + bioAvailable.ok,
  reveal the "Sign in with Face ID / Touch ID / fingerprint" button at
  the top. Label is set from the actual biometryType returned by the
  plugin so users see what their device supports.
- Tap → verifyIdentity (OS prompt) → getCredentials → fill the email +
  password fields → fire the existing form submit so all the regular
  flow runs (turnstile, 2FA prompt, error handling, session storage).
- Explicit logout deletes credentials AND clears the local flag,
  hiding the button on the next visit. Auto-logout (token expiry,
  network) does NOT come through that path, so biometric persists
  across silent session resets.

Storage choice — password not JWT:
- JWTs expire and the storage would constantly need refresh.
- Storing the password lets the standard /api/auth/login flow run,
  which already handles password-rotation (a stale stored password
  just fails 401 → user falls back to typing the new one → re-enrolls).
- The password sits in OS-level secure storage, accessible only after
  successful biometric verification — same security posture as a
  password manager autofill.

Files:
- mobile/package.json: add capacitor-native-biometric@^5.0.0 (Capacitor 6
  compat)
- mobile/android/app/src/main/AndroidManifest.xml: add USE_BIOMETRIC
  uses-permission
- mobile/ios/App/App/Info.plist: add NSFaceIDUsageDescription string
- public/js/auth.js: bioPlugin/bioAvailable/bioStored/bioEnroll/
  bioRetrieve/bioForget helpers; window.PedBio surface; reveal-on-load;
  click handler; post-login enrollment prompt; logout cleanup
- public/index.html: hidden #btn-bio-login + #bio-divider above the
  email field on the login form
- public/css/styles.css: themed gradient button + hover lift
- mobile/README.md: feature list updated

Build steps for Daniel:
  cd mobile && npm install        # picks up capacitor-native-biometric
  npx cap sync                    # ports the plugin into android/ + ios/
  # then build APK / IPA as usual
2026-04-28 03:09:38 +02:00
Daniel
503f5afaad feat: ED multi-stage UX, extensions polish, docs viewer + application-logic docs
Three concurrent themes from this session:

═══════════════════════════════════════════════════════════════════
ED ENCOUNTERS — per-stage cards + consolidate→MDM finalize
═══════════════════════════════════════════════════════════════════

UX redesign per Daniel's feedback ("every stage note should be shown,
if AI is told to modify that particular note then the modified version
is used in final mdm"):

- Each generated stage stays on screen as its own editable card with
  its own embedded "Don't Miss" panel. No more single rolling note
  element that gets replaced on each generation.
- gatherCurrentNotes() reads contenteditable text from each stage card
  before any operation (advance, finalize, persist) so inline edits
  flow into the next AI call and the final consolidate.
- Stage badge is now state-accurate. "Stage N (recording)" with yellow
  background after Add-more before generation; "Stage N" with gray
  after generation. Fixes the bug where the badge flipped to Stage 2
  the moment Add-more was clicked.
- Save & Done now runs TWO server-side AI calls in /finalize:
  1. edConsolidate (new prompt) → polished single final note that
     integrates every stage chronologically (HPI / ROS / PE / ED Course /
     A&P with disposition).
  2. edFinalize (rewritten with full inline 2023 AMA E/M element
     rubric — problems / data / risk definitions, level mapping with
     concrete examples) → MDM JSON.
- Two new cards render after finalize: blue-bordered Final Consolidated
  Note + green-bordered MDM. Stage cards become read-only.
- partial_data on the saved row now stores {stages, finalNote, mdm,
  finalized} so resume re-renders the full state.

Why two-call finalize: a single combined prompt makes the model cut
corners on one task. Two focused calls cost ~2× latency at the very end
of an encounter — acceptable since finalize is a one-time terminal
action, not a per-stage hot path.

Files: public/components/ed-encounter.html, public/js/ed-encounters.js,
src/routes/edEncounters.js, src/utils/prompts.js (edConsolidate added,
edFinalize rewritten).

═══════════════════════════════════════════════════════════════════
EXTENSIONS / PAGERS — visual polish
═══════════════════════════════════════════════════════════════════

Multiple iterations based on Daniel's feedback:

- Layout: align-items:flex-start so action buttons stay pinned top-right
  when long numbers wrap (was align-items:center → buttons drifted into
  the text area, causing visible overlap).
- Number: word-break:break-all + min-width:0 + font-feature-settings:tnum
  so long numbers wrap within their column instead of pushing under the
  buttons. Click-to-copy with a 0.55s green flash + ✓ copied badge.
- Phone/pager Font Awesome icon next to the number in the type color —
  at-a-glance type signal (replacing an earlier 3px left stripe that
  Daniel found visually bulky).
- Name: font-weight 700, font-size 14.5px, color g900, letter-spacing
  -0.012em — scan-target headline typography for long lists.
- Alternating subtle backgrounds by index (white vs #fafbfc) so a long
  list reads as distinct rows.
- Hover: card lifts 1px with a soft shadow; action buttons fade from
  55% to 100% opacity. Cubic-bezier transition on transform.
- Entrance: staggered fade-up animation per card (35ms × index, capped
  at 12). prefers-reduced-motion media query disables motion.
- Empty state: 48px FA icon + heading instead of plain gray text.

Files: public/js/extensions.js, public/css/styles.css.

═══════════════════════════════════════════════════════════════════
DOCS REORGANIZATION + APPLICATION-LOGIC DOCS + ADMIN VIEWER
═══════════════════════════════════════════════════════════════════

Document moves (preserving git history via git mv):
  BROWSER_WHISPER_SETUP.md          → docs/browser-whisper-setup.md
  BROWSER_WHISPER_TROUBLESHOOTING.md → docs/browser-whisper-troubleshooting.md
  DEVELOPER_GUIDE.md                → docs/developer-guide-extended.md
  EMBEDDINGS_SETUP.md               → docs/embeddings-setup.md
  FEATURES_EXPLAINED.md             → docs/features-explained.md
  IMPROVEMENTS.md                   → docs/improvements.md
  OPENID_SETUP.md                   → docs/openid-setup.md
  TRANSCRIPTION_OPTIONS.md          → docs/transcription-options.md
README.md updated with the new paths + a Documentation section that
links to docs/logic/ at the top.

New application-logic doc series (~8,300 lines total) at docs/logic/.
Built with 5 parallel doc-writing agents per Daniel's "use multiple
agents" directive. Each doc explains how a part of the app actually
works — application logic, data flow, design decisions, sacred zones,
how-to-extend recipes — at a depth that lets a new dev (or an AI
assistant) modify the code confidently.

  docs/logic/README.md                — index + recommended reading order
  docs/logic/architecture.md (2166 L) — frontend IIFE pattern, lazy tab
                                         load, backend route convention,
                                         schema, encryption, deployment
  docs/logic/clinical-notes.md (1546L) — every note tab + helper trio
  docs/logic/bedside-and-calculators.md (1373L) — bedside ES module
                                         pocket + calculators + PE Guide
                                         + suture selector
  docs/logic/auth-admin-learning.md (1281L) — auth (local+OIDC+2FA) +
                                         admin panel + Learning Hub
                                         (Quiz engine logic at sub-detail
                                         only — TODO follow-up)
  docs/logic/ai-and-voice.md (1128 L) — callAI 5-provider routing,
                                         prompts, voice/STT, helper trio
  docs/logic/ed-encounters.md (821 L) — multi-stage ED + MDM (this
                                         session's worked example)

Admin-only docs viewer:
- New route /api/admin/docs/{tree,file}: recursively walks docs/, returns
  the tree as JSON; /file?path=X validates path stays inside docs/ and
  renders markdown via marked. Both gated by req.user.role==='admin'.
- New tab "Docs" (book icon) in the sidebar, hidden by default and
  revealed in auth.js when user.role==='admin' (same pattern as the
  existing Admin and CMS tabs).
- New component public/components/admin-docs.html: split-pane layout
  with a tree sidebar + filter input + a markdown reader pane.
- New module public/js/admin-docs.js: lazy-loads the tree on first tab
  activation, renders collapsible folders, persists expanded state and
  last-opened path via UIState. Server-rendered HTML so no client
  markdown parser needed.
- CSS for the viewer (responsive split-pane, code-block styling, table
  scrolling, etc.).
- Mounted at /api/admin/docs (NOT /api) — important: mounting a router
  with router.use(authMiddleware) at /api accidentally 401s every other
  /api/* path (caught and fixed during testing — /api/health was 401'ing).

Files: docs/* (moved + new), README.md, public/components/admin-docs.html
(new), public/js/admin-docs.js (new), src/routes/adminDocs.js (new),
public/index.html (tab + section + script), public/js/auth.js (admin
gate + logout cleanup), public/css/styles.css (viewer styles), server.js
(mount).

═══════════════════════════════════════════════════════════════════
KNOWN GAPS (TODO follow-ups)
═══════════════════════════════════════════════════════════════════

- Learning Hub quiz engine (MCQ / multi-select / T-F scoring + attempt
  tracking + progress dashboard) is covered at the architectural level
  in docs/logic/auth-admin-learning.md but not drilled into the quiz
  data model and scoring flow. Worth a focused follow-up doc.
- ED finalize: if MDM step JSON parse fails, server returns 502 with
  the consolidated finalNote in the error payload, but client doesn't
  surface the partial result. Add a "MDM failed, retry" affordance.
- No e2e Playwright coverage for ED encounters or the new docs viewer.
2026-04-28 03:09:38 +02:00
Daniel
0360685306 Hide APK download link on the native Android app
The "Download Android app (APK)" link on the login page is pointless
when the user is already inside the Capacitor app. Wrapped the link
in id="apk-download-link" and added a native-app-only hide pass in
auth.js that runs against a short array of web-only element IDs.

Add more entries to that array as other web-only UI appears, so the
mobile wrapper can diverge cleanly from the web UI without branching
the HTML.
2026-04-14 22:47:59 +02:00
Daniel
5888a9da0e Fix: local-auth users lose Password/2FA/Sessions after refresh
Previous check was strict (canLocalAuth !== true → hide). On a
transient /me hiccup or when the boot cache lagged, a legit local
user saw empty Settings with none of the sections they should see.

Inverted the predicate: hide only when canLocalAuth === false
(explicit SSO-only signal from the server). Undefined/missing now
defaults to show — local-auth users never lose their own UI.
Still hides correctly for the documented SSO-only case because the
/me endpoint sets the flag to false explicitly for those users.
2026-04-14 05:32:30 +02:00
Daniel
63f77aa9cf Batch of security + scale fixes
Age parser (src/routes/billing.js):
  - Now sums year + month + week + day matches so "4 yr 11 mo"
    (59 months) correctly maps to the 5-11y billing bracket instead
    of being billed as 1-4y. Added bounds sanity check.

Graceful SIGTERM shutdown (server.js):
  - Closes the HTTP listener first, then drains batched audit queues,
    then ends the Postgres pool. 9-second hard deadline to beat
    Docker's 10-second SIGKILL. Previously an in-flight note save
    during a container restart could truncate the write.

Explicit LLM fallback opt-in (src/utils/ai.js):
  - The OpenRouter / LiteLLM silent fallback now requires admin
    setting `ai.allow_model_fallback = true` (default: false). If
    primary fails and fallback is disabled, the error is surfaced
    to the caller. Prevents silent spillover from a BAA-covered
    primary to a non-covered fallback.

Prompt injection delimiters (src/utils/promptSafe.js):
  - Wraps user transcripts, dictations, refine-instructions, and
    pasted documents in <UNTRUSTED_*>...</UNTRUSTED_*> tags and
    appends an explicit system instruction telling the model to
    treat the wrapped content as data rather than commands.
  - Applied to soap.js, hpi.js, refine.js. Extend to other AI
    routes incrementally.

Cross-tab logout sync (public/js/authFetch.js, auth.js):
  - BroadcastChannel('pedscribe-auth') — logout in one tab posts
    a message; all sibling tabs clear state and reload, dropping
    any PHI-containing UI immediately.

Backup code race-free consumption (src/routes/auth.js):
  - tryConsumeBackupCode() now uses a Postgres transaction with
    SELECT ... FOR UPDATE so concurrent login attempts using the
    same code serialize. First wins, second sees the already-
    shortened array.

Optimistic encounter locking (migrations/...add-encounter-version):
  - saved_encounters.version INTEGER NOT NULL DEFAULT 1
  - POST /api/encounters/saved accepts an expected_version and
    rejects with 409 if the row has advanced. Falls back to
    last-write-wins if the client doesn't pass one (backward compat).

Audit log batching (src/utils/auditQueue.js):
  - Audit / api_log / access_log writes are buffered in memory and
    flushed every 1s or every 50 entries via one multi-row INSERT.
    Under load this reduces DB pressure by ~50x. On SIGTERM the
    shutdown path drains the queue before exiting.
2026-04-14 05:24:40 +02:00
Daniel
a8992aee5a Hide Active Sessions for SSO-only users
Follows the same pattern as Change Password and 2FA sections —
hidden by default in the HTML, revealed only when canLocalAuth=true.

Why: revoke technically deletes the PedScribe session row and clears
the cookie on that device, but the SSO user can re-auth instantly
because their IdP session is still live. Surfacing a "revoke" button
that the IdP will immediately undo is misleading. SSO users now see
only the SSO-relevant sections of Settings.
2026-04-14 05:07:07 +02:00
Daniel
37e58be5ec Fix local-auth sections not showing for normal users + backup-code modal signature
settings load2FAStatus():
  - Explicit credentials: 'same-origin' on the /me fetch (was relying
    on fetch defaults, which can behave oddly in some browsers/edges)
  - Fall back to window.CURRENT_USER (cached at login) if /me fails,
    so local-auth users still see their password/2FA sections after
    a transient error. Keeps cache in sync on each successful fetch.

enterApp():
  - Cache the logged-in user object on window.CURRENT_USER so modules
    that need the canLocalAuth flag don't have to re-fetch /me.

2FA regenerate modal:
  - Previous call passed a wrong-shape options object to showConfirm.
    Updated to the correct (message, callback, opts) signature with
    input:true, inputType:'password', placeholder, required.

OIDC email_verified check:
  - Accept boolean true or string 'true' for robustness. Some IdPs
    serialize ID-token booleans as strings.
2026-04-14 04:43:07 +02:00
Daniel
c7a04626a3 Hide change-password + 2FA by default, show only when canLocalAuth=true
Sections were briefly visible for SSO-only users before load2FAStatus
resolved and hid them. Flipped the default: both sections now carry
style="display:none" in the HTML and are revealed only when the /me
fetch confirms the user has a real password hash.

SSO-only users never see the sections, even for a flash.
2026-04-14 04:38:28 +02:00
Daniel
fc17032649 Server-side SSO/local-auth enforcement + OIDC account-link hardening
Endpoint guards (defense-in-depth over hidden UI):
  - POST /api/auth/change-password: 400 with SSO-aware message if
    the caller's stored password is not a real bcrypt/argon2 hash.
    Prior behaviour was to fail at passwords.verify() with an
    ambiguous "current password is incorrect".
  - POST /api/auth/setup-2fa: 400 with same SSO-aware message for
    SSO-only accounts. Prior behaviour allowed TOTP setup on an
    account where it could never actually trigger (user never logs
    in locally).

OIDC account-link safety (src/routes/oidc.js):
  - Auto-link to an existing local account now requires the IdP to
    assert email_verified=true in the ID token (or userinfo). If
    absent/false, the callback redirects with ?error=email_unverified.
    Prevents an attacker at a misconfigured IdP from taking over a
    local account by claiming an email they don't own.
  - If an existing user already has oidc_sub set and the incoming
    sub is different, refuse with ?error=sub_mismatch. Prior
    behaviour silently did nothing, hiding a potential attack.
  - Audit 'oidc_linked' written on first successful link.

Frontend:
  - Added user-facing messages for the two new SSO error codes.
2026-04-14 04:35:00 +02:00
Daniel
e161c221c4 Idle timeout observability + cut write frequency in half + hide local-auth UI for SSO-only users
Middleware:
  - Log to console.warn + audit_log when a session is killed for
    inactivity. Shows up in Grafana/Loki so you can see how often
    users actually get kicked. Audit action: 'session_idle_timeout'
  - last_activity throttle bumped 5 min → 10 min — halves DB writes
    per active user. Idle precision slop widens to 24h00-24h10;
    still invisible in practice.

Per-user local-auth visibility:
  - /api/auth/me now returns user.canLocalAuth: true when the stored
    password is a real bcrypt / argon2 hash, false for the random
    blob OIDC auto-creates for SSO-only users.
  - Settings page hides "Change Password" and "Two-Factor
    Authentication" sections when canLocalAuth is false — those UIs
    are meaningless for users whose sign-in lives at the IdP.
  - Password hash is not leaked in the /me payload.

Mobile (restating existing behaviour for clarity): no idle check,
365-day JWT in Keychain/Keystore, never auto-logs-out. Only logout
triggers are: manual logout, password change, admin revoke, JWT hit
365d, or app uninstall.
2026-04-14 04:32:53 +02:00
Daniel
6dffdf91e5 Sliding 24h idle timeout (web) + persistent mobile + 2FA backup codes
Session model:
  Web     — 24h sliding idle timeout enforced server-side via
             user_sessions.last_activity. 30-day JWT + cookie are a
             safety net; middleware is the real clock. Cookie is
             re-set on active use so browsers match the sliding window.
  Mobile  — 365-day JWT, no idle timeout (stays persistent via Keychain
             / Keystore). Detected via User-Agent ("PedScribe" /
             "Capacitor") or X-Client: mobile header.

2FA backup codes:
  - 10 single-use codes generated when 2FA is first enabled
  - Stored as bcrypt hashes in new users.totp_backup_codes column
  - Consumed atomically on successful login fallback (when TOTP fails)
  - Regenerate endpoint (POST /api/auth/2fa/backup-codes) requires
    current password; invalidates prior codes
  - Count endpoint (GET /api/auth/2fa/backup-codes/count) powers a
    "N codes remaining" indicator on the 2FA settings card
  - Modal shows codes exactly once with Copy + Download .txt actions
  - Codes cleared when 2FA is disabled

New files:
  src/utils/platform.js — isMobileClient() helper

Schema migration (idempotent):
  ALTER TABLE users ADD COLUMN IF NOT EXISTS totp_backup_codes TEXT
2026-04-14 04:24:54 +02:00
Daniel
fa16cb13cb Hybrid auth: cookie-only on web, Keychain Bearer on mobile
Runtime split driven by window.Capacitor.isNativePlatform():

  Web browser
    - No token in localStorage / sessionStorage — XSS can't read it
    - Server-set httpOnly cookie carries the session
    - fetch() default credentials='same-origin' sends the cookie
    - getAuthHeaders() returns Content-Type only, no Authorization
    - Middleware already falls back to cookie when Bearer is absent

  Capacitor native (iOS / Android)
    - Unchanged — Bearer token lives in Keychain / Keystore via the
      capacitor-secure-storage-plugin SecureStorage wrapper
    - Bearer header still sent on every request

enterApp() / clearSession() / getAuthHeaders() all now branch on
isNativeApp(). Legacy localStorage entries from the dual-mode era
are wiped on clearSession() for users migrating in.

Rollback: git reset --hard pre-httponly-only-2026-04-14
2026-04-14 04:11:55 +02:00
Daniel
93bc44b5e0 Security hardening: low-risk easy wins
- JWT_SECRET fails fast at startup in production
- CORS fails closed if APP_URL + CORS_ORIGINS are both missing
- Explicit HSTS (1y, includeSubDomains, preload)
- Rate limit sensitive auth endpoints (change-password, 2FA)
- /api/health now returns {ok:true}; details gated behind admin auth
- Login enumeration removed — generic 401 + dummy bcrypt on miss
- ReDoS guard: 20KB input cap on /suggest-codes
- showToast uses textContent, no innerHTML
- clearSession() clears service worker caches on logout
- OIDC state is now HMAC-signed and stateless (survives restart)
- SSRF guard on admin-set OIDC issuer (blocks private IPs, requires HTTPS)

Adds docs/mobile-build.md covering APK build, release, git push,
keystore, and troubleshooting for both PedScribe and PedsHub apps.
2026-04-14 02:42:32 +02:00
Daniel
8409a49c74 Add hardware-backed secure storage for mobile auth token
Web still uses localStorage; Capacitor native app now routes
token/user/session-id through capacitor-secure-storage-plugin
(iOS Keychain, Android EncryptedSharedPreferences / Keystore).

A thin SecureStorage wrapper detects Capacitor at runtime and
falls back to localStorage elsewhere, keeping a single auth.js
codebase for both targets.

To activate on mobile: cd mobile && npm install && npx cap sync android
2026-04-14 02:33:32 +02:00
Daniel
ee88e51f14 Add automatic ICD-10 and CPT billing code suggestions
New feature: after generating any clinical note, the app automatically
suggests relevant billing codes displayed as clickable chips below the output.

Backend (src/routes/billing.js):
- POST /api/suggest-codes endpoint analyzes note text
- Extracts diagnoses from Assessment section via regex
- Looks up ICD-10 codes: local common pediatric map (40+ conditions)
  first, then NLM Clinical Tables API for unknown terms
- Suggests CPT E/M codes based on note type, visit complexity,
  ROS/PE system counts, and MDM level estimation
- Supports: outpatient (new/established), well visit (age-based),
  ED, inpatient (admit/subsequent/discharge)

Frontend (public/js/app.js):
- suggestBillingCodes() renders collapsible card with ICD-10 and CPT chips
- Click any chip to copy the code to clipboard
- Shows E/M level assessment (diagnosis count, ROS, PE, MDM complexity)
- Disclaimer: "Suggestions only. Always verify codes."

Integration: called after note generation in all 6 tabs
(encounter, SOAP, sick visit, well visit, hospital course, chart review)
2026-04-11 01:50:17 +02:00
Daniel
79994f4781 Replace all browser dialogs with modern modal, add OIDC admin UI
- Add reusable showConfirm() modal component (supports plain confirm,
  input prompt, danger styling, Enter key)
- Replace ALL 18 confirm() and prompt() calls across 8 JS files with
  showConfirm() modal: admin user actions, session revoke, document
  delete, template delete, milestone management, transcription settings
- Fix broken admin reset-password (btn was undefined in scope)
- Add OIDC/SSO configuration UI to Admin Panel (issuer, client ID/secret,
  button label, disable local auth toggle, callback URL display)
2026-04-09 02:43:23 +02:00
Daniel
adf1365fa2 Fix session revocation bug that could log out current device
- Fix: DELETE all other sessions query used empty string fallback when
  req.sessionId was undefined, causing id != '' to match ALL rows
  (including current session). Now skips deletion if sessionId unknown.
- Fix: Revoke All endpoint returns error if current session not identified
- Fix: var confirm shadowing window.confirm in password change handler
2026-04-09 02:33:00 +02:00
Daniel
4fa2b58d75 Remove prompt() dialogs, breach warnings, cost display; fix 2FA disable UI
- Replace browser prompt() with inline UI for: 2FA disable (password field),
  admin password reset (inline input), admin test email (inline input)
- Remove all password breach warning UI (login, register, settings)
  Backend HIBP check endpoint remains but is no longer called from frontend
- Remove model cost display from dropdown and header badge
- Hide empty cost-badge element in header
- Fix model dropdown to flat list (no category grouping)
2026-04-09 02:27:55 +02:00
Daniel
020e831b3c v6.2: Session management, password change, audit logging, refine context, UI fixes
Security:
- Add session management: users can view/revoke active sessions in Settings
- Add password change in Settings (requires current password, HIBP check)
- Force logout all sessions on password reset
- Fix logout to destroy server-side session (was only clearing cookie)
- Add trust proxy for correct client IP in rate limiting and audit logs
- Add CORS support for multiple domains (CORS_ORIGINS env var)
- Add HIBP breach check endpoint and inline warnings on password fields

Audit logging:
- Add audit logging to all 24 PHI-handling endpoints across 13 route files
- Covers: generation, transcription, TTS, refine, encounters, documents, Nextcloud
- All fire-and-forget (no response delay)

AI improvements:
- Refine now includes original source material (transcript, notes, labs)
  so AI can reference the full input when modifying output
- Add correction tracking (trackAIOutput) to sick visit and well visit tabs
- Fix sickvisit missing from encounter save noteIdMap

UI fixes:
- Non-blocking busy bar for transcription and AI generation (replaces full-screen overlay)
- Fix encounter recording: hide record button during recording (was showing two stop buttons)
- Fix ROS/PE "All WNL" stacking duplicate event handlers; add Clear buttons
- Enlarge AI instructions textarea in Learning Hub CMS

Domain:
- Primary domain now app.pedshub.com, with scribe.pedshub.com and peds.danvics.com as CORS origins
2026-04-08 20:27:45 +02:00
Daniel
a36235c646 v6.1: Turnstile bot protection, LiteLLM provider, PPTX tables, audio backup fixes, docs
- Add Cloudflare Turnstile to login, register, and password reset forms
- Switch AI provider to LiteLLM, transcription to OpenAI Whisper
- Change domain to scribe.pedshub.com
- Fix PPTX export: add tables, bold/italic, numbered lists, code blocks, blockquotes
- Fix announcement banner close button (CSP was blocking inline onclick)
- Fix auth middleware: empty Bearer token now falls through to cookie auth
- Fix audio backups: only save on transcription failure, stop auto-deleting on success
- Soften AI correction injection to prevent model hallucination from correction history
- Fix LiteLLM TTS model name handling (no incorrect openai/ prefix)
- Expand AI instructions textarea in Learning Hub CMS
- Update README for v6 with all features and providers
- Add comprehensive docs/: architecture, API reference, database schema,
  authentication, AI providers, speech, learning hub, configuration, deployment
2026-04-04 22:56:24 +02:00
ifedan-ed
f609891d0d Security: remove auth debug logging that exposed emails and responses
Removed console.log statements in auth.js that logged email addresses
and auth API responses to browser console. Final cleanup for v9.
2026-03-29 10:41:35 +00:00
ifedan-ed
9e79a05676 Zero-config speech: skip upload when no transcription API, use browser speech directly
- Add GET /api/transcribe/status endpoint — returns whether any server
  transcription provider (Whisper/AWS/Local) is configured
- Frontend checks status on login via checkTranscribeStatus()
- When no provider configured: recording stops instantly, keeps live
  Web Speech API text, shows friendly toast — no error, no upload wait
- Works in encounter, dictation, and SOAP tabs
- App now works fully out-of-the-box with just an AI provider key
2026-03-29 02:09:53 +00:00
Daniel Onyejesi
5cad43d19a Security fixes: remove SSO token from URL, add prompt boundaries
- OIDC callback now passes only ?sso=ok flag, token stays in
  httpOnly cookie (prevents token leaking to logs/referrer/history)
- Frontend auth.js uses cookie-based auth for SSO flow
- Add [PHYSICIAN TEMPLATES] boundary markers around physicianMemories
  in all 5 generation routes to mitigate prompt injection
- Consistent boundary format across wellVisit, sickVisit, hpi, soap,
  hospitalCourse
2026-03-25 19:25:49 -04:00
Daniel Onyejesi
898036bfcd Remove Firefox speech notice, fix auth.js SSO flow race condition
- Remove Firefox speech recognition notice (not needed)
- Fix missing closing brace that made speech recognition unreachable
- Fix auth.js SSO token handling to prevent brief auth screen flash
2026-03-25 19:04:20 -04:00
Daniel Onyejesi
17646af5e3 Add OpenID Connect SSO + Firefox speech notice
OIDC/SSO:
- New /api/auth/oidc route with PKCE for secure authorization
- Supports Azure AD, Okta, Keycloak, PocketID, Google, any OIDC provider
- Admin configurable: issuer, client ID/secret, button label
- Option to disable local auth (force SSO only)
- Auto-creates users on first SSO login, links existing by email
- SSO button on login page, hidden until admin enables OIDC

Firefox:
- Show info toast on first recording that live preview requires
  Chrome/Edge; server-side transcription still works in all browsers
2026-03-25 18:54:44 -04:00
Daniel Onyejesi
230a73be3a Add resend verification link on login + rate limit (3/15min) 2026-03-24 14:14:42 -04:00
Daniel Onyejesi
01f6a38ee2 Fix login flash, quiz in presentations, revert viewer body, feed labels
Login flash:
- Auth screen now hidden by CSS default (#auth-screen{display:none !important})
- auth.js shows it only when there is no valid token or token is expired
- No more flash of login page on refresh for logged-in users

Presentation quiz option (AI Generate panel):
- Presentation type now shows optional quiz question toggle (same as article)
- Backend: when questionCount>0, returns JSON {marpMarkdown, questions[]}
  instead of plain Marp markdown
- applyAiContent fills both the Marp textarea and question blocks for presentations

Viewer revert:
- Removed the viewer presentation card change (user wants markdown as-is)
- Removed dangling viewer button wiring

Feed/CMS list:
- Presentation type shows correct icon (fa-presentation-screen) and
  label "Slides" in the CMS content list
2026-03-24 02:50:31 -04:00
Daniel Onyejesi
21c1c5ea6d Revert auth to localStorage tokens, fix slide padding, AI panel options
REVERT: httpOnly cookie auth removed — reverts to JWT in localStorage.
The cookie implementation broke the login page (always-hidden auth screen).
localStorage token approach is restored fully:
- Login/register return token in JSON body
- getAuthHeaders() sends Authorization: Bearer header
- Session check reads localStorage token on load
- clearSession() removes localStorage token

Fix: slide preview padding — section elements now have 40px 48px padding
so text is not flush against the frame edges.

Kept from v3.14: AI panel context-aware options (word count, slide count,
quiz question toggle), delete confirmation wording per content type.
2026-03-24 01:57:59 -04:00
Daniel Onyejesi
9d63625987 AI panel context-aware options, delete wording, httpOnly cookie auth
AI Generate panel:
- Content type synced from editor on open
- Article/Pearl: optional word count field
- Presentation: optional slide count field
- Questions row: checkbox toggle for article/pearl (optional), always on for quiz,
  hidden for presentation; count input shown only when enabled
- Backend: passes wordCount/slideCount to prompt; questionCount=0 skips questions

Delete confirmation:
- Wording built dynamically from content type
- Presentation: no mention of questions
- Quiz: "All quiz questions will be permanently removed"
- Article/pearl: "Any quiz questions attached will also be removed"

Auth refactor — JWT → httpOnly cookie:
- Backend: setAuthCookie() sets ped_auth as httpOnly, Secure, SameSite=Lax, 7d
- Backend: clearAuthCookie() on POST /api/auth/logout (new endpoint)
- Backend: auth middleware reads ped_auth cookie first, falls back to Bearer header
- Login/register: no longer return token in JSON body; cookie is the session
- Frontend: getAuthHeaders() returns only Content-Type (no Authorization header)
- Frontend: session check uses /api/auth/me via cookie (no localStorage token)
- Frontend: clearSession() calls /api/auth/logout to clear cookie server-side
- Frontend: no token in localStorage; window.AUTH_TOKEN removed
- All FormData fetches use credentials:'same-origin' (cookie sent automatically)
- index.html: optimistic auth-screen hide (removed localStorage token check)

Tested: login, logout, /api/auth/me, admin routes, FormData uploads, cookie httpOnly
flag, 401 without cookie, cookie cleared on logout.
2026-03-24 01:46:07 -04:00
Daniel Onyejesi
8aa1c5d0f7 Fix Quill link tooltip positioning and registration flash
Quill tooltip: move tooltip element to document.body via patchQuillTooltip()
so overflow:hidden on .cms-main cannot clip it. Recalculates position from
container-relative to viewport (fixed) coordinates with viewport clamping.
Removes overflow:hidden from quill wrappers; applies border-radius to toolbar/container.

Registration: hide #show-register by default in HTML; reveal only after
registration-status fetch confirms enabled=true. Endpoint already returns 403
when disabled — no backend change needed.
2026-03-23 23:09:21 -04:00
Daniel Onyejesi
28464308ba Dedicated CMS page, responsive email templates, security fixes in auth
- New dedicated Content Manager tab (WordPress-like layout) with:
  - Stats dashboard (published, drafts, categories, quizzes, attempts)
  - Sidebar with category tree and filter controls (status, category)
  - Table-style content list with search
  - Full-page editor with title bar, meta fields, body editor, quiz builder
- Content Manager visible only for admin and moderator roles in sidebar
- Removed CMS from admin panel (admin panel is admin-only again)
- Email templates: fully responsive with max-width, proper mobile breakpoints,
  table-based layout for Outlook/Gmail compatibility, no overflow
- Security: escape all user data in emails with escHtml(), escape APP_URL
  in verify-email HTML, replace raw err.message with generic errors in auth
- Security: email body from admin settings now HTML-escaped before rendering
2026-03-23 20:13:22 -04:00
Daniel Onyejesi
4af622913f v3.1: Add Learning Hub with CMS, quizzes, and 3-role user system
- New Learning Hub under Pediatric menu with content feed, category browsing,
  search, content viewer, and interactive quizzes (MCQ, true/false)
- Quiz system with per-option wrong-answer explanations and general explanations
- Admin CMS for creating/editing categories, content (articles, pearls, quizzes),
  and inline question builder with answer options
- 3-role system: admin (full access), moderator (can manage Learning Hub content),
  user (all clinical features + learning hub read access)
- 5 new database tables: learning_categories, learning_content, learning_questions,
  learning_options, learning_progress
- User progress tracking with score history per quiz
- Moderators see "Content Manager" tab instead of full Admin panel
2026-03-23 19:32:47 -04:00
Daniel Onyejesi
2da4401d80 Fix: admin models/2FA loading, save doubles, sidebar collapse, SSHADESS copy
- Fix 2FA status stuck at "Loading...": export load2FAStatus globally so
  app.js tabChanged handler can call it when navigating via sidebar
- Fix admin models silent failure: add error message + retry button on catch
- Fix save encounter doubles: persist _savedEncId_* to sessionStorage so
  page refresh reuses existing record instead of inserting a duplicate;
  add _savingInProgress guard to prevent race-condition double-saves
- Desktop sidebar collapsible: add collapse/expand buttons (not collapsed
  by default), state saved to localStorage; hidden on mobile
- Copy to Visit Note now also copies SSHADESS assessment to wv-shadess-text
- Store selected visit age in window._wellVisitAge + sessionStorage so
  other tabs can read the patient's age
- Bigger screening/vaccine boxes: min-height on wv-vax-list, wv-screen-list,
  wv-visit-detail; slightly more padding on vaccine items
- Wire New Patient (clearTab) buttons to document click handler
2026-03-22 18:33:28 -04:00
Daniel Onyejesi
56b8961a55 Feat: left sidebar nav, tab persistence, admin models fix, hospital/chart save
- Replace horizontal tab-nav with collapsible left sidebar (sticky desktop, slide-in mobile with hamburger toggle)
- Fix tab persistence: use localStorage instead of URL hash; restore last tab after login in enterApp()
- Fix admin CMS models loading: move autoDeleteDays read inside .then() callback (was ReferenceError), switch admin loading from click-only to tabChanged event
- Add Save/Load bars to Hospital Course and Chart Review tabs with popover support
- Add wv (well visit) save handler in encounters.js
- Register load handlers for hospital and chart tabs
- Expand popover prefix list to include hosp and chart
2026-03-22 17:17:45 -04:00
Daniel Onyejesi
5dd08f8da3 Feat: admin CMS, save/resume encounters, user templates, SSHADESS, well visit notes, sick visit, ROS/PE checklists, ICD-10 diagnoses
- Admin CMS: announcements, feature flags, email templates, AI prompts, SMTP, model management, reset-to-defaults
- Save/resume encounter progress with 7-day auto-expiry and patient labels
- Inline searchable load popover (replaces settings-modal redirect)
- User memory/template system (physical exam, ROS, encounter format, etc.)
- SSHADESS psychosocial screening form (8 domains, listen-in recording)
- Well visit note generation with vitals, vaccines, screenings, SSHADESS
- Interactive screenings/vaccines status buttons (Done/Refused/Already Given/N/A)
- ROS 15-system checklist + PE 17-system checklist in well visit note tab
- ICD-10 diagnoses tag picker (28 common pediatric codes + free text)
- Simple sick visit tab: chief complaint, inferred ROS (4) + PE (7), diagnoses, generate note
- Settings converted from modal to full-page tab
- Fix: /api/models moved before authenticated routes (was returning 401 → empty model selector)
- Fix: getUserMemoryContext always fetches from API regardless of cache state
- Pause/resume recording on all recording tabs
- Site-level SMTP config stored in DB; ElevenLabs TTS with browser fallback
2026-03-22 16:43:39 -04:00
Daniel Onyejesi
e74c0ccb0c Fix: clear password fields after autofill delay and add autocomplete=off on login form 2026-03-22 12:18:29 -04:00
Daniel Onyejesi
39a1affcbc Fix: clear password fields, remove has-session class, and reset hash on logout 2026-03-22 12:13:41 -04:00
Daniel Onyejesi
393cb3f1e0 Fix: hide auth screen immediately on load if token exists, preventing login flash 2026-03-22 00:31:49 -04:00
ifedan-ed
ac8e7bb890 v3.0.0: Auth, admin panel, security fixes, per-tab model selector
- Add authMiddleware to all AI/transcribe routes (were unauthenticated)
- Add full admin panel: user management, registration toggle, stats
- Fix XSS in email verification (escape user.name in HTML)
- Fix missing APP_URL fallback in password reset email
- Add per-tab model selector (respects OpenRouter/Bedrock/Azure lists)
- Fix transcribeAudio to send Authorization header
- Fix labs input: textarea instead of single-line input
- Add structured logging: audit_log, api_log, access_log tables
- Add admin CLI (admin-cli.js) for Docker exec management
- Fix duplicate var duration declaration in ai.js catch block
- Fix RETURNING check case-sensitivity in database.js
2026-03-21 19:25:51 -04:00
ifedan-ed
565bec9ca8 v2.0.0: Pediatric AI Scribe
Features:
- Live encounter recording → HPI (outpatient/inpatient)
- Voice dictation → HPI / SOAP note
- Hospital course generator (prose/day-by-day/organ system/psych)
- Chart review / precharting (outpatient/subspecialty/ED)
- SOAP note generator (full/subjective only)
- Developmental milestones (AAP/Nelson) with narrative + 3-sentence summary
- AI refine & shorten for all outputs
- Ask AI what's missing (clarification)
- Authentication (email/password, email verification, 2FA)
- Nextcloud integration with auto date folders
- PWA support (installable on phone)
- 18+ AI models via OpenRouter
- HIPAA compliance guidance
- Docker support
2026-03-21 16:55:50 -04:00