The same snippets sent DeepSeek into the same 26,000-character reasoning
spiral three times running, each ending in an empty reply at the token
ceiling. A retry now rotates the snippets. Production sets
clinical_assistant.prompt_model to gpt-4.1-mini, a model that does not
think about a list of questions; the setting is now documented with why.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
The feature was removed; the docs still described it as live. Worst of
it was api-reference.md, which documented nine /api/learning endpoints
and fourteen /api/admin/learning CMS endpoints — routes that answer 404
— plus POST /api/user/webdav-path, whose column was dropped by
migration. Anyone reading them was reading fiction.
Checked against the running system rather than assumed: no learning
table exists, users.webdav_learning_path is gone, generated_image_links
is gone, and no route mounts /api/learning or /api/admin/learning.
Two things that look like Learning Hub and are not, so they stay:
- learningRetrieval.js is live — My Resources uses it. Its settings keep
the learning.* names because renaming them would orphan whatever an
administrator has already set. retrieval-tuning.md now says so instead
of listing the rows under two different feature names.
- the moderator role is still assignable. It gated the CMS and now
grants nothing; authentication.md says that rather than implying
powers it does not have. moderatorMiddleware has no callers left,
which is worth removing on its own.
auth-admin-learning.md is now auth-admin.md.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
Embeddings existed here for Learning Hub semantic search — the card said
so itself. Learning Hub was removed, and nothing took its place: the
clinical corpus is embedded by the indexing service, not by this app.
What was left was a settings page that configured a model, tested it,
reported its dimensions, and fed nothing.
src/utils/embeddings.js had exactly one importer, src/routes/adminConfig
.js, which used it for the three routes this deletes. Outside those, the
only mentions of embedding in the server were a comment and a settings
prefix.
Gone: the module, its three admin routes, the dimension probe, the
Discover & test kind and its two panels, the admin.js block behind them,
the embeddings. prefix from both the writable-settings allowlist and the
lockdown list (it can no longer be written at all, so locking it says
nothing), and docs/embeddings-setup.md, which documented Learning Hub
search end to end.
'embedding' stays in NON_CHAT_MODES — that is the filter keeping
embedding models out of the chat-model list, and the gateway still
serves them.
Docs still describe nine /api/learning endpoints that no longer exist,
left from the Learning Hub removal. Not touched here; that is its own
subject.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
Three pairs of docs described the same thing twice, and the copies had drifted
apart. Merged each into one file, keeping the unique content from both:
- ARCHITECTURE.md -> architecture.md (its operational map: ownership, request
flow, runtime boundaries, source of truth, deployment shape)
- DEVELOPMENT.md -> developer-guide.md (change workflow, Clinical Assistant
high-risk areas, frontend rendering rules, deployment checks)
- transcription-options.md -> speech.md (the clinic setup table, and the list
of browser-Whisper paths that must stay removed)
Then audited what remained against the code and the live database rather than
against the previous docs. Corrected:
- Google Vertex was still documented as a provider across nine files. The SDK
is gone; AI_PROVIDER=vertex now logs an advisory and falls back to
OpenRouter, and Gemini is reached through LiteLLM. Fixed the provider
selection order to match src/utils/ai.js, which starts from LITELLM_API_BASE.
- promptSafe was documented on 8 routes; it is on 13.
- Node 20 -> 24, "24 vanilla JS modules" -> no fixed count, and
transcribe.js/tts.js -> sttProvider.js/ttsProvider.js, which is what exists.
- STT/TTS are LiteLLM-only; README listed direct Google, AWS Transcribe and
ElevenLabs paths that are not in the runtime.
- Learning Hub PPTX export was documented as pptxgenjs, which is not a
dependency. It is pandoc against a reference deck.
- POST /api/admin/milestones/seed does not exist; it is /bulk-import.
- NEXTCLOUD_URL and NTFY_TOPIC are not read anywhere. Nextcloud is per-user in
the users table, and the ntfy topic is derived as pedscribe-{userId}.
- A prose paragraph sat inside the Clinical Assistant settings table, so half
the rows rendered as text.
Filled the gaps the audit exposed:
- database.md was missing 12 of 29 tables, including user_resources,
personal_notes, login_codes, registration_invites and generated_image_jobs.
- developer-guide.md was missing 11 routers and 10 frontend modules.
- api-reference.md detailed 121 of 244 endpoints and said so, but whole
features were absent. Added an endpoint index covering Clinical Assistant,
My Resources, Notes, Diagrams, ED Encounters, invites and sign-in codes.
- configuration.md was missing METRICS_TOKEN, REDIS_URL, API_RATE_LIMIT_MAX,
the LITELLM_* model variables, the DB_* ones maintenance.js reads, and the
per-purpose S3 resolution scheme.
- clinical-assistant.md documented 2 of its 17 environment variables.
- features-explained.md had no entry for My Resources or Clinical Assistant.
Renamed the three remaining SHOUTING filenames to kebab-case, which is what the
docs viewer's prettyName() was working around, and rewrote README's index,
which listed architecture.md twice and omitted nine files.
Noted but not changed: the Turnstile site key is hardcoded in index.html rather
than read from TURNSTILE_SITE_KEY, and /api/health/detailed can report
tts: 'elevenlabs' though no ElevenLabs path exists.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
Nothing documented My Resources, the slide renderer, PubMed or web search, and
the authentication doc predated both sign-in codes and registration invitations.
docs/my-resources.md is new and covers the feature end to end: what a resource
is, where its material comes from, why both searches run in the route rather
than as tools the model never called, why keyword engines get the topic while
retrieval gets the instruction too, how a presentation is designed as a deck
rather than written as markdown, the separate multi-image path, and what the
export pipeline is made of.
docs/authentication.md gains sign-in codes — storage, lifetime, reuse,
supersession, guessing, and that two-factor still applies — and registration
invitations, including the exact condition that decides when a code may be
deleted and why it is written to match the status the list displays. Both new
rate limits are in the table, with a note that Express matches app.use paths on
segment boundaries, so a new sign-in endpoint needs its own limiter or it has
none at all.
docs/deployment.md now says what the runtime image carries and why — pandoc for
Word, python3 with apk-installed lxml and pillow for the slide renderer,
python-pptx pinned, and that PDF conversion is not in the image at all but goes
to Gotenberg, so Word and PowerPoint still work when it is down.
docs/configuration.md picks up LOGIN_RATE_LIMIT_MAX, LOGIN_CODE_RATE_LIMIT_MAX
and GOTENBERG_URL, none of which were listed. README gains a My Resources
section and indexes the two new docs.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
The pathway existed but was reachable only by API. It now has a tab of its own
next to the Learning Hub — related, not the same thing, and sitting together is
how someone discovers the difference — visible to every signed-in user with no
role gate in the markup.
Generate a deck or an article, see everything you have made, download each as
PowerPoint, Word or PDF, delete what you no longer want. The screen says
"Private to you" and "Nobody else sees these", because the distinction from
published Learning content is the thing a person needs to understand before
typing a patient's condition into it.
Downloads are fetched rather than linked: an <a href> cannot carry the
Authorization header. The blob is saved under the filename the server chose and
the object URL is revoked afterwards. Resource titles come from a model, so rows
are built as elements and a title is only ever assigned to textContent.
The e2e stack now joins danvics_convert too. It could previously reach only
Postgres and Redis, so a PDF download failed there in a way production would
not — which did at least prove the degradation path works: with Gotenberg
unreachable the response is "PDF conversion is unavailable right now. PowerPoint
and Word still work", and the other two formats download unaffected.
Verified in a browser as an ordinary user: the tab appears and opens, the form
swaps slide count for word count when the format changes, the library lists
their own work, and pptx, docx and pdf all download with sensible filenames
(36360, 13285 and 68310 bytes).
Also documents retrieval sizing in docs/retrieval-tuning.md — the per-feature
budgets, and RERANKER_TOP_K, which caps all of them and had until now appeared
in no configuration file at all.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
- docs/speech.md: a new Recording section (wake lock and why it is re-taken
on visibility, idempotent start, what happens when a recording ends by
itself, what signing out does), the retention rules, and step-by-step
instructions for moving audio backups to MinIO.
- Records that the model for a transcription is the user's choice first,
which is why the picker must only ever offer models the gateway has, and
that LITELLM_STT_MODELS is a fallback rather than a list known to work.
- api-reference: /api/transcribe takes `module` and returns `backupId`, and
the Audio Backups group is no longer failure-only.
- configuration.md and .env.example document AUDIO_BACKUPS_S3_*, preferring
the _FILE credential variants.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Dv6sqaY6Vq3ChZHMem3cnU
- Add neonatal assessment calculator: GA classification (extremely preterm through
post term), weight-for-GA percentile (AGA/SGA/LGA) using Fenton 2013 LMS data,
birth weight category (ELBW/VLBW/LBW/normal/macrosomia)
- Add DOCX support via mammoth, PPTX/ODT/EPUB via jszip in Learning Hub content
generator file upload
- Add gatewayUrl() helper for consistent API URL construction — handles
LITELLM_API_BASE with or without /v1 suffix, works with any OpenAI-compatible
gateway (LiteLLM, Bifrost, etc.)
- Fix TTS model/voice separation: discovery now tags items as MODEL or VOICE,
auto-detects provider from voice name (Vertex, ElevenLabs, OpenAI)
- Fix STT discovery to include ElevenLabs Scribe and Chirp models
- Fix TTS discovery to include ElevenLabs and Vertex voices alongside models
- Fix admin model test to bypass allowlist check (skipAllowlistCheck) so
discovered models can be tested before adding
- Fix Nextcloud token decryption in learningAI.js WebDAV browse and file import
- Fix admin embedding test to show DB model name instead of hardcoded default
- Fix admin STT test to use correct endpoint for Whisper models
- Add AI gateway migration guide to configuration docs
- Add Grafana dashboard JSON for Loki log visualization
- Drop first/second-person voice; reference-style prose throughout
- Remove stale information; align with current code (argon2id primary, hybrid cookie/Bearer auth, sliding 24h idle, AES-256-GCM PHI at rest, backup codes, node-pg-migrate, collation-drift guard, multi-arch Docker, auto-version pipeline)
- Preserve all technical accuracy and code examples
- Remove any remaining references to separate PedsHub Quiz app
- Keep consistent tone across files (tables + code blocks, imperatives where needed)
- api-reference.md and developer-guide.md route tables expanded to reflect current routes (billing, sessions)
- Add Cloudflare Turnstile to login, register, and password reset forms
- Switch AI provider to LiteLLM, transcription to OpenAI Whisper
- Change domain to scribe.pedshub.com
- Fix PPTX export: add tables, bold/italic, numbered lists, code blocks, blockquotes
- Fix announcement banner close button (CSP was blocking inline onclick)
- Fix auth middleware: empty Bearer token now falls through to cookie auth
- Fix audio backups: only save on transcription failure, stop auto-deleting on success
- Soften AI correction injection to prevent model hallucination from correction history
- Fix LiteLLM TTS model name handling (no incorrect openai/ prefix)
- Expand AI instructions textarea in Learning Hub CMS
- Update README for v6 with all features and providers
- Add comprehensive docs/: architecture, API reference, database schema,
authentication, AI providers, speech, learning hub, configuration, deployment
