From cfaf8e957b5f49131ce74393d9273e101b871e34 Mon Sep 17 00:00:00 2001 From: Daniel Date: Mon, 7 Sep 2026 04:01:01 +0200 Subject: [PATCH] feat: ship reviewed prompt history, conversation limits and account protections --- .dockerignore | 3 + .forgejo/workflows/android-apk.yml | 14 + .forgejo/workflows/docker-build.yml | 16 +- .github/workflows/android-release.yml | 15 + .github/workflows/build-apk.yml | 15 + .github/workflows/ci.yml | 6 +- .github/workflows/docker-publish.yml | 17 + .github/workflows/security.yml | 4 +- CONTRIBUTING.md | 2 +- Dockerfile | 12 +- README.md | 3 +- docker-compose.e2e.yml | 5 +- docker-compose.local.yml | 5 +- docker-compose.yml | 5 +- docs/DEVELOPMENT.md | 6 +- docs/deployment.md | 33 +- docs/developer-guide.md | 4 +- docs/global-prompt-administration.md | 76 + .../1777700000000_add-prompt-revisions.js | 60 + package-lock.json | 2757 +++-------------- package.json | 22 +- public/components/admin.html | 48 +- public/components/assistant.html | 137 +- public/components/cms.html | 4 +- public/components/settings.html | 6 +- public/css/assistant.css | 120 + public/css/styles.css | 6 + public/index.html | 11 +- public/js/accountBoundary.js | 218 ++ public/js/admin.js | 511 +-- public/js/admin/clinicalAssistant.js | 328 ++ public/js/app.js | 146 +- public/js/assistant/api.js | 7 + public/js/assistant/sources.js | 20 +- public/js/audioBackup.js | 76 +- public/js/auth.js | 329 +- public/js/authFetch.js | 167 +- public/js/clinicalAssistant.js | 162 +- public/js/documents.js | 6 +- public/js/ed-encounters.js | 27 +- public/js/encounters.js | 22 +- public/js/learningHub.js | 5 +- public/js/notes.js | 17 +- public/js/notes/recorder.js | 7 +- public/js/secureStorage.js | 14 +- public/js/wellVisit.js | 6 +- scripts/build-image.sh | 16 + scripts/release.sh | 34 +- server.js | 51 +- src/routes/admin.js | 2 +- src/routes/adminConfig.js | 128 +- src/routes/auth.js | 35 +- src/routes/clinicalAssistant.js | 182 +- src/routes/edEncounters.js | 2 +- src/routes/hospitalCourse.js | 2 +- src/routes/hpi.js | 4 +- src/routes/learningAI.js | 5 +- src/routes/memories.js | 1 + src/routes/nextcloud.js | 2 + src/routes/notes.js | 13 +- src/routes/oidc.js | 61 +- src/routes/sickVisit.js | 2 +- src/routes/soap.js | 2 +- src/routes/tts.js | 2 +- src/routes/userPreferences.js | 5 + src/routes/wellVisit.js | 2 +- src/utils/ai.js | 63 +- src/utils/buildId.js | 28 + src/utils/clinicalAnswer.js | 5 +- src/utils/clinicalConversation.js | 109 + src/utils/clinicalMcpClient.js | 199 +- src/utils/clinicalPrompts.js | 17 + src/utils/clinicalRetrieval.js | 101 +- src/utils/extensionTransfer.js | 20 +- src/utils/models.js | 76 +- src/utils/policy.js | 35 + src/utils/promptCatalog.js | 62 + src/utils/promptRevisions.js | 108 + src/utils/prompts.js | 31 +- src/utils/ttsProvider.js | 2 +- test/account-boundary.test.js | 1122 +++++++ test/admin-clinical-assistant-wiring.test.js | 115 + test/assistant-component-css.test.js | 152 + test/assistant-sources-cleaning.test.js | 42 +- test/build-id.test.js | 92 + test/clinical-assistant-prompt-pool.test.js | 2 +- test/clinical-conversation.test.js | 414 +++ test/clinical-mcp-session-lifecycle.test.js | 435 ++- test/clinical-notes-entrypoints.test.js | 2 +- test/clinical-release-integration.test.js | 131 + test/clinical-table-preservation.test.js | 78 + test/extension-transfer.test.js | 71 + test/frontend-prompt-env.test.js | 454 +++ test/mcp-shutdown.test.js | 56 + test/model-defaults.test.js | 26 - test/policy-flows.test.js | 556 ++++ test/policy-ui.test.js | 49 + test/prompt-administration.test.js | 318 ++ test/release.test.js | 62 + test/session-quiz-ed-regressions.test.js | 8 +- 100 files changed, 7316 insertions(+), 3756 deletions(-) create mode 100644 docs/global-prompt-administration.md create mode 100644 migrations/1777700000000_add-prompt-revisions.js create mode 100644 public/css/assistant.css create mode 100644 public/js/accountBoundary.js create mode 100644 public/js/admin/clinicalAssistant.js create mode 100755 scripts/build-image.sh create mode 100644 src/utils/buildId.js create mode 100644 src/utils/clinicalConversation.js create mode 100644 src/utils/clinicalPrompts.js create mode 100644 src/utils/policy.js create mode 100644 src/utils/promptCatalog.js create mode 100644 src/utils/promptRevisions.js create mode 100644 test/account-boundary.test.js create mode 100644 test/admin-clinical-assistant-wiring.test.js create mode 100644 test/assistant-component-css.test.js create mode 100644 test/build-id.test.js create mode 100644 test/clinical-conversation.test.js create mode 100644 test/clinical-release-integration.test.js create mode 100644 test/clinical-table-preservation.test.js create mode 100644 test/frontend-prompt-env.test.js create mode 100644 test/mcp-shutdown.test.js create mode 100644 test/policy-flows.test.js create mode 100644 test/policy-ui.test.js create mode 100644 test/prompt-administration.test.js create mode 100644 test/release.test.js diff --git a/.dockerignore b/.dockerignore index 7bc0b6c4..f97eadd8 100644 --- a/.dockerignore +++ b/.dockerignore @@ -8,3 +8,6 @@ data/ *.log *.md .DS_Store + +# Always generated inside the image from the validated build argument. +BUILD_ID diff --git a/.forgejo/workflows/android-apk.yml b/.forgejo/workflows/android-apk.yml index fcb12748..d39364d5 100644 --- a/.forgejo/workflows/android-apk.yml +++ b/.forgejo/workflows/android-apk.yml @@ -9,7 +9,21 @@ on: - 'v*' jobs: + root-test: + name: Root app tests + runs-on: forgejo-local + steps: + - uses: actions/checkout@v4 + - uses: https://github.com/actions/setup-node@v4 + with: + node-version: '24' + cache: npm + cache-dependency-path: package-lock.json + - run: npm ci + - run: npm test + build: + needs: root-test name: Build signed APK runs-on: forgejo-local steps: diff --git a/.forgejo/workflows/docker-build.yml b/.forgejo/workflows/docker-build.yml index 556bf69a..566ec971 100644 --- a/.forgejo/workflows/docker-build.yml +++ b/.forgejo/workflows/docker-build.yml @@ -9,7 +9,21 @@ on: default: 'true' jobs: + root-test: + name: Root app tests + runs-on: forgejo-local + steps: + - uses: actions/checkout@v4 + - uses: https://github.com/actions/setup-node@v4 + with: + node-version: '24' + cache: npm + cache-dependency-path: package-lock.json + - run: npm ci + - run: npm test + build: + needs: root-test name: Build Docker image runs-on: forgejo-local steps: @@ -24,7 +38,7 @@ jobs: run: docker compose -f docker-compose.yml config >/tmp/ped-ai-compose.yml - name: Build compose service - run: docker compose -f docker-compose.yml build pediatric-scribe + run: ./scripts/build-image.sh - name: Tag image run: | diff --git a/.github/workflows/android-release.yml b/.github/workflows/android-release.yml index 8f21363e..d0c08386 100644 --- a/.github/workflows/android-release.yml +++ b/.github/workflows/android-release.yml @@ -20,7 +20,22 @@ permissions: contents: write # needed to create GitHub releases from the runner jobs: + root-test: + if: ${{ github.server_url == 'https://github.com' }} + name: Root app tests + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-node@v4 + with: + node-version: '24' + cache: npm + cache-dependency-path: package-lock.json + - run: npm ci + - run: npm test + build: + needs: root-test if: ${{ github.server_url == 'https://github.com' }} name: Build signed APK runs-on: ubuntu-latest diff --git a/.github/workflows/build-apk.yml b/.github/workflows/build-apk.yml index 87fc873c..416b0b4e 100644 --- a/.github/workflows/build-apk.yml +++ b/.github/workflows/build-apk.yml @@ -13,7 +13,22 @@ env: APP_URL: ${{ github.event.inputs.app_url || secrets.APP_URL || 'https://peds.danvics.com' }} jobs: + root-test: + if: ${{ github.server_url == 'https://github.com' }} + name: Root app tests + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-node@v4 + with: + node-version: '24' + cache: npm + cache-dependency-path: package-lock.json + - run: npm ci + - run: npm test + build-apk: + needs: root-test if: ${{ github.server_url == 'https://github.com' }} runs-on: ubuntu-latest permissions: diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index b1d11e70..f7de32fe 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -20,15 +20,15 @@ jobs: - name: Checkout uses: actions/checkout@v4 - - name: Setup Node 22 + - name: Setup Node 24 uses: actions/setup-node@v4 with: - node-version: '22' + node-version: '24' cache: 'npm' cache-dependency-path: package-lock.json - name: Install - run: npm install + run: npm ci - name: Unit tests run: npm test diff --git a/.github/workflows/docker-publish.yml b/.github/workflows/docker-publish.yml index df027b87..d49ee3ce 100644 --- a/.github/workflows/docker-publish.yml +++ b/.github/workflows/docker-publish.yml @@ -23,7 +23,22 @@ env: IMAGE: danielonyejesi/pediatric-ai-scribe-v3 jobs: + root-test: + if: ${{ github.server_url == 'https://github.com' }} + name: Root app tests + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-node@v4 + with: + node-version: '24' + cache: npm + cache-dependency-path: package-lock.json + - run: npm ci + - run: npm test + build: + needs: root-test if: ${{ github.server_url == 'https://github.com' }} # Build one variant per matrix entry, push by digest only. name: Build ${{ matrix.platform }} @@ -60,6 +75,8 @@ jobs: uses: docker/build-push-action@v5 with: context: . + build-args: | + GIT_REVISION=${{ github.sha }} platforms: ${{ matrix.platform }} labels: ${{ steps.meta.outputs.labels }} outputs: type=image,name=${{ env.IMAGE }},push-by-digest=true,name-canonical=true,push=true diff --git a/.github/workflows/security.yml b/.github/workflows/security.yml index 6dd3d93d..ef497abe 100644 --- a/.github/workflows/security.yml +++ b/.github/workflows/security.yml @@ -17,10 +17,10 @@ jobs: - name: Checkout uses: actions/checkout@v4 - - name: Setup Node 22 + - name: Setup Node 24 uses: actions/setup-node@v4 with: - node-version: '22' + node-version: '24' - name: Audit root app run: | diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 7785ad8d..90a7d5fc 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -42,7 +42,7 @@ Web changes hot-reload via browser refresh (JS/CSS cached 1h — add `?v=` query or clear cache; the build-ID server-side cache-buster appends `?v=` automatically on fresh page loads). -Server code changes require `docker compose build pediatric-scribe && docker compose up -d`. +Server code changes require `./scripts/build-image.sh && docker compose up -d --no-build`. ## Mobile diff --git a/Dockerfile b/Dockerfile index d1581ce3..7f04120e 100644 --- a/Dockerfile +++ b/Dockerfile @@ -3,7 +3,7 @@ # safe to drop into the Node alpine image as-is. FROM openbao/openbao:2.5.3 AS bao-src -FROM node:20-alpine +FROM node:24-alpine WORKDIR /app @@ -17,14 +17,20 @@ RUN apk add --no-cache ffmpeg curl jq COPY --from=bao-src /bin/bao /usr/local/bin/bao RUN /usr/local/bin/bao version -COPY package.json ./ +COPY package.json package-lock.json ./ # argon2 compiles native code via node-gyp — needs python3/make/g++ at build time RUN apk add --no-cache --virtual .build-deps python3 make g++ \ - && npm install --omit=dev \ + && npm ci --omit=dev \ && apk del .build-deps COPY . . +# One validated source revision for both runtime cache busting and OCI provenance. +# Direct development builds without an explicit revision remain visibly unversioned. +ARG GIT_REVISION=unknown +RUN node -e 'const r=process.argv[1]; if (r !== "unknown" && !require("./src/utils/buildId").isGitRevision(r)) throw new Error("GIT_REVISION must be a full lowercase Git SHA"); require("node:fs").writeFileSync("BUILD_ID", r + "\n");' -- "$GIT_REVISION" +LABEL org.opencontainers.image.revision=$GIT_REVISION + # Ensure the entrypoint is executable regardless of host file permissions RUN chmod +x /app/docker-entrypoint.sh diff --git a/README.md b/README.md index a0c2a671..1afd358e 100644 --- a/README.md +++ b/README.md @@ -57,7 +57,8 @@ Speech-to-text is handled server-side through configured providers such as Googl ```bash cp .env.example .env -docker compose up -d --build +./scripts/build-image.sh +docker compose up -d --no-build ``` The default compose exposes the app on `127.0.0.1:3552` and starts: diff --git a/docker-compose.e2e.yml b/docker-compose.e2e.yml index 820cfe6a..e475873f 100644 --- a/docker-compose.e2e.yml +++ b/docker-compose.e2e.yml @@ -11,7 +11,10 @@ services: pediatric-scribe-e2e: - build: . + build: + context: . + args: + GIT_REVISION: ${GIT_REVISION:-unknown} image: ped-ai-local:latest ports: - "127.0.0.1:3553:3000" diff --git a/docker-compose.local.yml b/docker-compose.local.yml index 4da2ad6e..e25dcef3 100644 --- a/docker-compose.local.yml +++ b/docker-compose.local.yml @@ -1,6 +1,9 @@ services: pediatric-scribe: - build: . + build: + context: . + args: + GIT_REVISION: ${GIT_REVISION:-unknown} ports: - "3552:3000" env_file: diff --git a/docker-compose.yml b/docker-compose.yml index 35458aee..18949b41 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -1,6 +1,9 @@ services: pediatric-scribe: - build: . + build: + context: . + args: + GIT_REVISION: ${GIT_REVISION:-unknown} image: ped-ai-local:latest ports: - "127.0.0.1:3552:3000" diff --git a/docs/DEVELOPMENT.md b/docs/DEVELOPMENT.md index 043601d9..86ea9e8e 100644 --- a/docs/DEVELOPMENT.md +++ b/docs/DEVELOPMENT.md @@ -6,13 +6,15 @@ This is the practical guide for changing Ped-AI safely. ```bash cp .env.example .env -docker compose up -d --build +./scripts/build-image.sh +docker compose up -d --no-build curl -fsS http://127.0.0.1:3552/api/health ``` -Run tests from the repository root: +Use Node 24 LTS. Run a locked install and tests from the repository root: ```bash +npm ci npm test ``` diff --git a/docs/deployment.md b/docs/deployment.md index e67208e0..fcc85dae 100644 --- a/docs/deployment.md +++ b/docs/deployment.md @@ -21,9 +21,38 @@ git clone https://github.com/ifedan-ed/pediatric-ai-scribe-v3.git cd pediatric-ai-scribe-v3 cp .env.example .env # edit .env — required: APP_URL, JWT_SECRET, DATA_ENCRYPTION_KEY, DB_PASSWORD, an AI provider -docker compose up -d --build +./scripts/build-image.sh +docker compose up -d --no-build ``` +The build uses Node 24 LTS and `npm ci --omit=dev` from the root lockfile. +`./scripts/build-image.sh` resolves the full checkout Git commit (including +worktrees/packed refs) and passes `GIT_REVISION` through Compose. It only builds; +starting or replacing production services remains a separate reviewed step. +Use `COMPOSE_FILE=docker-compose.local.yml ./scripts/build-image.sh` for the local +variant. For direct Docker builds: + +```bash +docker build --build-arg GIT_REVISION="$(git rev-parse --verify 'HEAD^{commit}')" -t ped-ai-local:latest . +``` + +All Compose variants accept the same `GIT_REVISION` environment variable. A build without one is explicitly +`unknown` (unversioned development), not a release provenance claim. + +The Dockerfile rejects malformed revisions and writes the same full SHA to +`/app/BUILD_ID` and `org.opencontainers.image.revision`. `/api/build`, the +`X-Build-Id` header and asset query strings use that baked value. Git identifies +the source commit, not local uncommitted changes: release from a clean checkout; +a local dirty test image is not an exact representation of that commit. + +Forgejo's existing trusted push/manual release workflows run a Node 24 root +`npm ci` / `npm test` job on `forgejo-local`; APK and Docker jobs require it via +`needs`. No untrusted pull-request code may run on that privileged runner. +An isolated, unprivileged Forgejo PR runner is separate future provisioning, +not an assumed label in these workflows. GitHub-hosted PR CI uses Node 24; +GitHub release workflows also gate builds on root tests. Mobile dependency +versions and signing/publishing gates are unchanged. + The default compose starts `pediatric-ai-scribe` on `127.0.0.1:3552`, `pedscribe-db` internally, and `ped-ai-redis` internally. ## Minimum `.env` @@ -105,7 +134,7 @@ docker compose up -d ```bash git pull -docker compose build --no-cache +./scripts/build-image.sh --no-cache docker compose up -d ``` diff --git a/docs/developer-guide.md b/docs/developer-guide.md index b642307a..262dc9ad 100644 --- a/docs/developer-guide.md +++ b/docs/developer-guide.md @@ -73,7 +73,7 @@ request On boot: - `APP_VERSION` read from `package.json`, printed + returned by `/api/health/detailed`. -- `BUILD_ID` = short git HEAD SHA (or random on non-git deploys). Rewritten into HTML at startup. +- `BUILD_ID` = full Git HEAD SHA (worktrees and packed refs supported), or the validated image-baked revision. Unversioned development builds report `unknown`; no random SHA is invented. - `JWT_SECRET` / `DATA_ENCRYPTION_KEY` fail-fast if missing in production. - `initDatabase()` → `runMigrations()` → collation drift check. - SIGTERM / SIGINT handler drains the audit queue and closes the pool. @@ -358,7 +358,7 @@ catch it. ```bash docker compose up -d postgres # just the DB -npm install +npm ci cp .env.example .env # set JWT_SECRET, DATA_ENCRYPTION_KEY, provider credentials node server.js ``` diff --git a/docs/global-prompt-administration.md b/docs/global-prompt-administration.md new file mode 100644 index 00000000..0bdb6e08 --- /dev/null +++ b/docs/global-prompt-administration.md @@ -0,0 +1,76 @@ +# Global prompt administration and conversation budget + +`CLINICAL_ASSISTANT_CONVERSATION_CHARS` is the sole conversation budget source. +Missing/empty uses 120000; nonempty values must validate as an integer from 1000 +through 1000000. Invalid configuration returns 503 before query rewrite, +retrieval, handoff generation or chat provider calls. Counting is exactly +JavaScript string length (UTF-16 code units), including all history plus draft, +not model tokens. The old `clinical_assistant.conversation_chars` database value +is ignored and its generic config PUT is rejected. Status retains +`conversationChars`/`conversationUnit` and adds `conversationEnv`, +`conversationSource`, `conversationMeasure`. Admin config exposes the same +metadata as top-level `conversationBudget: {limit,unit,measure,env,source}`. +Full-history storage, 8 MiB saves and explicit successful-only handoffs are unchanged. + +## Catalogue and runtime use + +Authenticated admins can use `/api/admin/config/prompts`. Its finite catalogue +contains 29 AI Scribe strings, `clinical_assistant.system_behavior` for clinical +text answers, and `clinical_assistant.image_behavior` for both existing image +routes. Each entry includes `key`, `dbKey`, `value`, `family`, `purpose`, `usedBy`, +`revision`, and `editable`. Scribe defaults remain in `utils/prompts.js`; clinical +defaults and image assembly are in `utils/clinicalPrompts.js`. All shipped default +text is unchanged. The poster instruction follows the input and precedes the +existing conditional portrait/landscape suffixes. Fixed clinical citation +safeguards, retrieval and generation settings are unchanged. Memories and private +user templates are not part of this catalogue. + +## Revision API + +All endpoints below are under `/api/admin/config` and require the existing admin +gate. Prompt keys for history/reset/restore accept canonical `dbKey` or a bare +Scribe key. + +- `PUT /:dbKey` with `{value, expectedRevision?}` saves nonempty string text. +- `POST /prompts/:key/reset` with `{expectedRevision?}` removes the override and + records the current shipped default. +- `GET /prompts/:key/history?limit=20` returns `{success,revisions,revision}`; + newest first, at most 100. Metadata has `id`, `createdAt`, `createdBy`, + `restoredFrom`, `wasDefault`, never prompt text. +- `GET /prompts/:key/revisions/:id` returns `{success,revision}` with the recorded + `value` and metadata, checking key/id association. +- `POST /prompts/:key/restore` with `{revisionId,expectedRevision?}` restores the + recorded effective text **as an explicit override**, even when the historical + revision used a different shipped default. The new revision has `wasDefault:false` + and `restoredFrom` pointing to the original. Reset again to follow shipped defaults. + +Mutations return `{success:true,value,revision}`. Revision is the latest numeric +row id for that key, not a contiguous per-key counter; 0 means no history yet. +First mutation records the previous effective baseline plus the edit. Its baseline +actor is null (unknown), with capture time rather than an invented original edit +time. Provided stale `expectedRevision` returns 409 without changes; legacy callers +may omit it. Reload a conflicted editor before explicitly retrying. Other settings +retain their existing API contracts. + +## Persistence and verification + +Apply `1777700000000_add-prompt-revisions.js` through the existing migration runner +before edits. Missing schema fails prompt operations safely, without unversioned +fallback. The migration count increases from six to seven; old frozen checks that +assert six need a separate reviewed update, not changes to their evidence. + +`prompt_revisions` stores global administrative text, not credentials or private +content, matching plaintext global `app_settings` storage. A finite-key constraint, +append-only update/delete trigger and same-key restore FK protect history. Actor +ids are historical integers, not cascading foreign keys. One `db.pool.connect()` +client holds a per-key transaction advisory lock for baseline, revision append and +setting upsert/delete. Rollbacks do not publish memory changes; only committed +values mutate the original shared Scribe object. Scribe's existing process-local +cache model remains; this slice does not introduce multi-process invalidation. + +Run `node --test test/prompt-administration.test.js test/clinical-conversation.test.js` +with synthetic service boundaries, and the complete `npm test` suite. Tests include +actual admin middleware/routes, rollback/concurrency, missing schema, old-default +restore, default byte hashes, object identity and startup races, exact UTF-16 +boundaries, legacy DB ignoring, and both image routes. Migration SQL is dry-run +through the installed node-pg-migrate engine, not applied to a live database. diff --git a/migrations/1777700000000_add-prompt-revisions.js b/migrations/1777700000000_add-prompt-revisions.js new file mode 100644 index 00000000..007cab19 --- /dev/null +++ b/migrations/1777700000000_add-prompt-revisions.js @@ -0,0 +1,60 @@ +// Global prompts only. No private templates, Memories, or credential settings. +exports.up = pgm => { + pgm.sql(` + CREATE TABLE prompt_revisions ( + id SERIAL PRIMARY KEY, + prompt_key TEXT NOT NULL CHECK (prompt_key IN ( + 'prompt.hpiEncounter', + 'prompt.hpiDictation', + 'prompt.hpiInpatient', + 'prompt.hospitalCourseShort', + 'prompt.hospitalCourseLong', + 'prompt.hospitalCourseICU', + 'prompt.hospitalCoursePsych', + 'prompt.chartReviewOutpatient', + 'prompt.chartReviewSubspecialty', + 'prompt.chartReviewED', + 'prompt.soapFull', + 'prompt.soapSubjective', + 'prompt.milestoneNarrative', + 'prompt.milestoneList', + 'prompt.milestoneSummary', + 'prompt.peGuideNarrative', + 'prompt.peGuideList', + 'prompt.refine', + 'prompt.shortenDocument', + 'prompt.askClarification', + 'prompt.shadessAssessment', + 'prompt.wellVisitNote', + 'prompt.wellVisitShort', + 'prompt.sickVisitNote', + 'prompt.edEncounterStaged', + 'prompt.edConsolidate', + 'prompt.edFinalize', + 'prompt.dontMissTooltip', + 'prompt.patientEducation', + 'clinical_assistant.system_behavior', + 'clinical_assistant.image_behavior' + )), + value TEXT NOT NULL, + was_default BOOLEAN NOT NULL, + created_by INTEGER, + created_at TIMESTAMPTZ NOT NULL DEFAULT NOW(), + restored_from INTEGER, + UNIQUE (prompt_key, id), + FOREIGN KEY (prompt_key, restored_from) REFERENCES prompt_revisions (prompt_key, id) + ); + -- Actor is a historical id, not a FK that user deletion could rewrite. + CREATE FUNCTION reject_prompt_revision_mutation() RETURNS trigger LANGUAGE plpgsql AS $$ + BEGIN + RAISE EXCEPTION 'Prompt revisions are append-only'; + END; + $$; + CREATE TRIGGER prompt_revisions_immutable BEFORE UPDATE OR DELETE ON prompt_revisions + FOR EACH ROW EXECUTE FUNCTION reject_prompt_revision_mutation(); + `); +}; + +exports.down = pgm => { + pgm.sql('DROP TABLE prompt_revisions; DROP FUNCTION reject_prompt_revision_mutation();'); +}; diff --git a/package-lock.json b/package-lock.json index 7305413e..d86fb625 100644 --- a/package-lock.json +++ b/package-lock.json @@ -1,14 +1,13 @@ { "name": "pediatric-ai-scribe", - 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} - }, - "node_modules/socks-proxy-agent/node_modules/debug": { - "version": "4.4.3", - "resolved": "https://registry.npmjs.org/debug/-/debug-4.4.3.tgz", - "integrity": "sha512-RGwwWnwQvkVfavKVt22FGLw+xYSdzARwm0ru6DhTVA3umU5hZc28V3kO4stgYryrTlLpuvgI9GiijltAjNbcqA==", - "license": "MIT", - "dependencies": { - "ms": "^2.1.3" - }, - "engines": { - "node": ">=6.0" - }, - "peerDependenciesMeta": { - "supports-color": { - "optional": true - } - } - }, - "node_modules/socks-proxy-agent/node_modules/ms": { - "version": "2.1.3", - "resolved": "https://registry.npmjs.org/ms/-/ms-2.1.3.tgz", - "integrity": "sha512-6FlzubTLZG3J2a/NVCAleEhjzq5oxgHyaCU9yYXvcLsvoVaHJq/s5xXI6/XXP6tz7R9xAOtHnSO/tXtF3WRTlA==", - "license": "MIT" - }, - "node_modules/source-map": { - "version": "0.6.1", - "resolved": "https://registry.npmjs.org/source-map/-/source-map-0.6.1.tgz", - "integrity": "sha512-UjgapumWlbMhkBgzT7Ykc5YXUT46F0iKu8SGXq0bcwP5dz/h0Plj6enJqjz1Zbq2l5WaqYnrVbwWOWMyF3F47g==", - "license": "BSD-3-Clause", - "optional": true, - "engines": { - "node": ">=0.10.0" - } - }, "node_modules/source-map-js": { "version": "1.2.1", "resolved": "https://registry.npmjs.org/source-map-js/-/source-map-js-1.2.1.tgz", @@ -8346,12 +6548,12 @@ } }, "node_modules/speech-rule-engine": { - "version": "4.1.3", - "resolved": "https://registry.npmjs.org/speech-rule-engine/-/speech-rule-engine-4.1.3.tgz", - "integrity": "sha512-SBMgkuJYvP4F62daRfBNwYC2nXTEhNXAfsBZ/BB7Ly85/KnbnjmKM7/45ZrFbH6jIMiAliDUDPSZFUuXDvcg6A==", + "version": "4.1.4", + "resolved": "https://registry.npmjs.org/speech-rule-engine/-/speech-rule-engine-4.1.4.tgz", + "integrity": "sha512-i/VCLG1fvRc95pMHRqG4aQNscv+9aIsqA2oI7ZQS51sTdUcDHYX6cpT8/tqZ+enjs1tKVwbRBWgxut9SWn+f9g==", "license": "Apache-2.0", "dependencies": { - "@xmldom/xmldom": "0.9.9", + "@xmldom/xmldom": "0.9.10", "commander": "13.1.0", "wicked-good-xpath": "1.3.0" }, @@ -8400,17 +6602,6 @@ "node": ">=10.0.0" } }, - "node_modules/streamx": { - "version": "2.25.0", - "resolved": "https://registry.npmjs.org/streamx/-/streamx-2.25.0.tgz", - "integrity": "sha512-0nQuG6jf1w+wddNEEXCF4nTg3LtufWINB5eFEN+5TNZW7KWJp6x87+JFL43vaAUPyCfH1wID+mNVyW6OHtFamg==", - "license": "MIT", - "dependencies": { - "events-universal": "^1.0.0", - "fast-fifo": "^1.3.2", - "text-decoder": "^1.1.0" - } - }, "node_modules/string_decoder": { "version": "1.1.1", "resolved": "https://registry.npmjs.org/string_decoder/-/string_decoder-1.1.1.tgz", @@ -8452,19 +6643,6 @@ "node": ">=8" } }, - "node_modules/strnum": { - "version": "2.2.3", - "resolved": "https://registry.npmjs.org/strnum/-/strnum-2.2.3.tgz", - "integrity": "sha512-oKx6RUCuHfT3oyVjtnrmn19H1SiCqgJSg+54XqURKp5aCMbrXrhLjRN9TjuwMjiYstZ0MzDrHqkGZ5dFTKd+zg==", - "funding": [ - { - "type": "github", - "url": "https://github.com/sponsors/NaturalIntelligence" - } - ], - "license": "MIT", - "optional": true - }, "node_modules/symbol-tree": { "version": "3.2.4", "resolved": "https://registry.npmjs.org/symbol-tree/-/symbol-tree-3.2.4.tgz", @@ -8472,32 +6650,6 @@ "dev": true, "license": "MIT" }, - "node_modules/tar-fs": { - "version": "3.1.2", - "resolved": "https://registry.npmjs.org/tar-fs/-/tar-fs-3.1.2.tgz", - "integrity": "sha512-QGxxTxxyleAdyM3kpFs14ymbYmNFrfY+pHj7Z8FgtbZ7w2//VAgLMac7sT6nRpIHjppXO2AwwEOg0bPFVRcmXw==", - "license": "MIT", - "dependencies": { - "pump": "^3.0.0", - "tar-stream": "^3.1.5" - }, - "optionalDependencies": { - "bare-fs": "^4.0.1", - "bare-path": "^3.0.0" - } - }, - "node_modules/tar-stream": { - "version": "3.1.8", - "resolved": "https://registry.npmjs.org/tar-stream/-/tar-stream-3.1.8.tgz", - "integrity": "sha512-U6QpVRyCGHva435KoNWy9PRoi2IFYCgtEhq9nmrPPpbRacPs9IH4aJ3gbrFC8dPcXvdSZ4XXfXT5Fshbp2MtlQ==", - "license": "MIT", - "dependencies": { - "b4a": "^1.6.4", - "bare-fs": "^4.5.5", - "fast-fifo": "^1.2.0", - "streamx": "^2.15.0" - } - }, "node_modules/tdigest": { "version": "0.1.2", "resolved": "https://registry.npmjs.org/tdigest/-/tdigest-0.1.2.tgz", @@ -8507,24 +6659,6 @@ "bintrees": "1.0.2" } }, - "node_modules/teex": { - "version": "1.0.1", - "resolved": "https://registry.npmjs.org/teex/-/teex-1.0.1.tgz", - "integrity": "sha512-eYE6iEI62Ni1H8oIa7KlDU6uQBtqr4Eajni3wX7rpfXD8ysFx8z0+dri+KWEPWpBsxXfxu58x/0jvTVT1ekOSg==", - "license": "MIT", - "dependencies": { - "streamx": "^2.12.5" - } - }, - "node_modules/text-decoder": { - "version": "1.2.7", - "resolved": "https://registry.npmjs.org/text-decoder/-/text-decoder-1.2.7.tgz", - "integrity": "sha512-vlLytXkeP4xvEq2otHeJfSQIRyWxo/oZGEbXrtEEF9Hnmrdly59sUbzZ/QgyWuLYHctCHxFF4tRQZNQ9k60ExQ==", - "license": "Apache-2.0", - "dependencies": { - "b4a": "^1.6.4" - } - }, "node_modules/tldts": { "version": "7.0.28", "resolved": "https://registry.npmjs.org/tldts/-/tldts-7.0.28.tgz", @@ -8545,15 +6679,6 @@ "dev": true, "license": "MIT" }, - "node_modules/tmp": { - "version": "0.2.5", - "resolved": "https://registry.npmjs.org/tmp/-/tmp-0.2.5.tgz", - "integrity": "sha512-voyz6MApa1rQGUxT3E+BK7/ROe8itEx7vD8/HEvt4xwXucvQ5G5oeEiHkmHZJuBO21RpOf+YYm9MOivj709jow==", - "license": "MIT", - "engines": { - "node": ">=14.14" - } - }, "node_modules/toidentifier": { "version": "1.0.1", "resolved": "https://registry.npmjs.org/toidentifier/-/toidentifier-1.0.1.tgz", @@ -8586,7 +6711,8 @@ "version": "2.8.1", "resolved": "https://registry.npmjs.org/tslib/-/tslib-2.8.1.tgz", "integrity": "sha512-oJFu94HQb+KVduSUQL7wnpmqnfmLsOA/nAh6b6EH0wCEoK0/mPeXU6c3wKDV83MkOuHPRHtSXKKU99IBazS/2w==", - "license": "0BSD" + "license": "0BSD", + "optional": true }, "node_modules/type-is": { "version": "1.6.18", @@ -8601,12 +6727,6 @@ "node": ">= 0.6" } }, - "node_modules/typed-query-selector": { - "version": "2.12.1", - "resolved": "https://registry.npmjs.org/typed-query-selector/-/typed-query-selector-2.12.1.tgz", - "integrity": "sha512-uzR+FzI8qrUEIu96oaeBJmd9E7CFEiQ3goA5qCVgc4s5llSubcfGHq9yUstZx/k4s9dXHVKsE35YWoFyvEqEHA==", - "license": "MIT" - }, "node_modules/typedarray": { "version": "0.0.6", "resolved": "https://registry.npmjs.org/typedarray/-/typedarray-0.0.6.tgz", @@ -8626,9 +6746,9 @@ "license": "MIT" }, "node_modules/undici": { - "version": "7.25.0", - "resolved": "https://registry.npmjs.org/undici/-/undici-7.25.0.tgz", - "integrity": "sha512-xXnp4kTyor2Zq+J1FfPI6Eq3ew5h6Vl0F/8d9XU5zZQf1tX9s2Su1/3PiMmUANFULpmksxkClamIZcaUqryHsQ==", + "version": "7.29.1", + "resolved": "https://registry.npmjs.org/undici/-/undici-7.29.1.tgz", + "integrity": "sha512-RYONW2MeafgYlkVOKYKkA/Ag7BmXqgIWCa8t1m0JcxrQg9pI9lEqRhAOruOBCbAohOa/gkCF+iPi9hrgvTzu6Q==", "dev": true, "license": "MIT", "engines": { @@ -8716,12 +6836,6 @@ "node": ">= 14" } }, - "node_modules/webdriver-bidi-protocol": { - "version": "0.4.1", - "resolved": "https://registry.npmjs.org/webdriver-bidi-protocol/-/webdriver-bidi-protocol-0.4.1.tgz", - "integrity": "sha512-ARrjNjtWRRs2w4Tk7nqrf2gBI0QXWuOmMCx2hU+1jUt6d00MjMxURrhxhGbrsoiZKJrhTSTzbIrc554iKI10qw==", - "license": "Apache-2.0" - }, "node_modules/webidl-conversions": { "version": "3.0.1", "resolved": "https://registry.npmjs.org/webidl-conversions/-/webidl-conversions-3.0.1.tgz", @@ -8789,17 +6903,12 @@ "node": ">=8" } }, - "node_modules/wrappy": { - "version": "1.0.2", - "resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz", - "integrity": "sha512-l4Sp/DRseor9wL6EvV2+TuQn63dMkPjZ/sp9XkghTEbV9KlPS1xUsZ3u7/IQO4wxtcFB4bgpQPRcR3QCvezPcQ==", - "license": "ISC" - }, "node_modules/ws": { - "version": "8.20.0", - "resolved": "https://registry.npmjs.org/ws/-/ws-8.20.0.tgz", - "integrity": "sha512-sAt8BhgNbzCtgGbt2OxmpuryO63ZoDk/sqaB/znQm94T4fCEsy/yV+7CdC1kJhOU9lboAEU7R3kquuycDoibVA==", + "version": "8.21.3", + "resolved": "https://registry.npmjs.org/ws/-/ws-8.21.3.tgz", + "integrity": "sha512-201TZ/kPWxoPr/OKWjquZR1SWKXcvxdH+e1xrx89b3YbmzLMFCLfnaG1HFIgWzJOEWZ7MvpK++odZufgYR50Rw==", "license": "MIT", + "optional": true, "engines": { "node": ">=10.0.0" }, @@ -8919,36 +7028,6 @@ "engines": { "node": ">=6" } - }, - "node_modules/yauzl": { - "version": "2.10.0", - "resolved": "https://registry.npmjs.org/yauzl/-/yauzl-2.10.0.tgz", - "integrity": "sha512-p4a9I6X6nu6IhoGmBqAcbJy1mlC4j27vEPZX9F4L4/vZT3Lyq1VkFHw/V/PUcB9Buo+DG3iHkT0x3Qya58zc3g==", - "license": "MIT", - "dependencies": { - "buffer-crc32": "~0.2.3", - "fd-slicer": "~1.1.0" - } - }, - "node_modules/zod": { - "version": "3.25.76", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.25.76.tgz", - "integrity": "sha512-gzUt/qt81nXsFGKIFcC3YnfEAx5NkunCfnDlvuBSSFS02bcXu4Lmea0AFIUwbLWxWPx3d9p8S5QoaujKcNQxcQ==", - "license": "MIT", - "funding": { - "url": "https://github.com/sponsors/colinhacks" - } - }, - "node_modules/zod-to-json-schema": { - "version": "3.25.2", - "resolved": "https://registry.npmjs.org/zod-to-json-schema/-/zod-to-json-schema-3.25.2.tgz", - "integrity": "sha512-O/PgfnpT1xKSDeQYSCfRI5Gy3hPf91mKVDuYLUHZJMiDFptvP41MSnWofm8dnCm0256ZNfZIM7DSzuSMAFnjHA==", - "license": "ISC", - "optional": true, - "peer": true, - "peerDependencies": { - "zod": "^3.25.28 || ^4" - } } } } diff --git a/package.json b/package.json index aa6e0781..61ee5154 100644 --- a/package.json +++ b/package.json @@ -16,7 +16,6 @@ "migrate:new": "node-pg-migrate create" }, "dependencies": { - "@marp-team/marp-cli": "^4.3.1", "@marp-team/marp-core": "^4.3.0", "@tiptap/core": "^3.20.4", "@tiptap/extension-color": "^3.20.4", @@ -30,6 +29,7 @@ "bcryptjs": "^2.4.3", "cookie-parser": "^1.4.7", "cors": "^2.8.5", + "dompurify": "^3.4.1", "dotenv": "^16.4.5", "express": "^4.21.0", "express-rate-limit": "^7.4.0", @@ -40,7 +40,7 @@ "marked": "^18.0.2", "multer": "^1.4.5-lts.1", "node-pg-migrate": "^7.7.0", - "nodemailer": "^8.0.5", + "nodemailer": "9.0.1", "openai": "^4.73.0", "openid-client": "^6.8.2", "pdf-parse": "^1.1.1", @@ -60,7 +60,23 @@ "@google-cloud/vertexai": "^1.9.0" }, "devDependencies": { - "dompurify": "^3.4.1", "jsdom": "^29.0.2" + }, + "overrides": { + "node-pg-migrate": { + "glob": "11.1.0" + }, + "express": { + "qs": "6.16.0" + }, + "body-parser": { + "qs": "6.16.0" + }, + "speech-rule-engine": { + "@xmldom/xmldom": "0.9.12" + } + }, + "engines": { + "node": "24.x" } } diff --git a/public/components/admin.html b/public/components/admin.html index 4b0ac4df..ba747517 100644 --- a/public/components/admin.html +++ b/public/components/admin.html @@ -160,22 +160,15 @@ - +
-

AI Prompts

- Changes take effect immediately, no restart needed +

AI Scribe — plain-text / JSON instructions

+ Saved overrides replace shipped defaults immediately
-
-
- - -
- -
- - -
+
+

Global Scribe instructions for the operations listed under each prompt. These are not Clinical Assistant prompts or Markdown formatting controls. Personal Memories and templates are separate and are not managed here.

+
Loading Scribe prompts...
@@ -320,7 +313,7 @@
-
Starter prompt pool
+
Starter prompt pool — suggested questions, not global prompt history
Checking prompt pool...
@@ -343,21 +336,36 @@
- +
- +
+

The result limit also bounds selected sources; visual queries separately request up to 8 multimodal candidates before selection. Excerpt size is not the conversation budget.

- - + Conversation input budget — read-only server configuration +

Loading server budget metadata...

+

Set by CLINICAL_ASSISTANT_CONVERSATION_CHARS, or the server default when unset; legacy saved settings are ignored. Counts all prior user/assistant text plus the new question using JavaScript string length (UTF-16 code units), not provider tokens. Over-budget requests stop before inference; no automatic clipping or summarization.

+

Text answer output limits: 2,600 tokens initially and 5,000 for completion retries. Image input is separate: existing image routes trim and clip the user prompt at 5,000 UTF-16 code units before adding poster/layout instructions. This is not a new image budget or output-token limit.

+
+

Clinical Assistant TEXT — system behavior

+

Overrides the default behavior for retrieved text answers (including streaming). Fixed greeting/no-source replies, search rewrites and explicit handoff instructions are separate, not controlled by this editor.

+

Fixed citation safeguards (read-only): Use only retrieved evidence for factual claims and keep the exact provided source numbers. Do not invent, renumber, merge or move citations. Runtime evidence/citation safeguards are appended separately; this editor does not replace them.

+
Loading clinical text prompt...
+
+
+

Clinical Assistant IMAGE — poster instructions

+

Overrides the default poster instruction appended to the image user prompt by both direct and background-job image generation. Existing automatic portrait/landscape layout suffixes still follow it. This does not change text answers or image-job storage.

+
Loading clinical image prompt...
+
- - + + +
diff --git a/public/components/assistant.html b/public/components/assistant.html index 8025ae37..01402271 100644 --- a/public/components/assistant.html +++ b/public/components/assistant.html @@ -17,9 +17,11 @@ Admin model
- + + +
@@ -38,7 +40,16 @@
- + + +

Loading conversation limit; history and draft are counted in UTF-16 code units. The server validates each request.

+ +
@@ -84,124 +95,4 @@
- + diff --git a/public/components/cms.html b/public/components/cms.html index 96f45174..c79836c9 100644 --- a/public/components/cms.html +++ b/public/components/cms.html @@ -141,7 +141,7 @@
- +
@@ -168,7 +168,7 @@ -