Update README with embedding config, admin UI, cancellation, and deployment notes

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Daniel 2026-04-03 20:48:07 +02:00
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README.md
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# 🩺 PedQuiz
# PedQuiz
AI-powered pediatric knowledge quiz platform. Upload PDF study materials, automatically extract MCQ questions with AI, and take quizzes with text-to-speech support and semantic search.
@ -6,12 +6,14 @@ AI-powered pediatric knowledge quiz platform. Upload PDF study materials, automa
- **PDF → Quiz**: Upload PREP PDFs, AI extracts questions, answers, and explanations
- **Quiz Modes**: Study (instant feedback) and Exam (timed, scored)
- **Text-to-Speech**: OpenAI TTS, AWS Polly, ElevenLabs — voice selection per quiz
- **Semantic Search**: pgvector + AWS Titan Embed — finds questions by meaning, not just keywords
- **Text-to-Speech**: OpenAI TTS, AWS Polly, ElevenLabs, Google Cloud — voice selection per quiz
- **Semantic Search**: pgvector embeddings — finds questions by meaning, not just keywords
- **Embedding Model**: Configurable via Admin UI or env — supports any LiteLLM proxy model or AWS Bedrock
- **Job Cancellation**: Cancel running extractions from the web UI
- **Email Verification**: Required before first login; password reset via email
- **Role system**: Admin / Moderator / User
- **Nextcloud Integration**: Browse and import PDFs from your Nextcloud in Upload page
- **Themes**: Default and Markdown (GitHub-style)
- **Nextcloud Integration**: Browse and import PDFs from your Nextcloud
- **Themes**: Default and Warm Brown
## Stack
@ -19,12 +21,12 @@ AI-powered pediatric knowledge quiz platform. Upload PDF study materials, automa
|---|---|
| Frontend | React + React Router, plain CSS, Nginx |
| Backend | FastAPI, SQLAlchemy, PostgreSQL 16 + pgvector |
| AI/LLM | LiteLLM proxy (Claude, Gemini, GPT, Bedrock) |
| Embeddings | Configurable via Admin UI or `LITELLM_EMBEDDING_MODEL` env (default: `ge-gemini-embedding-001`) |
| AI/LLM | LiteLLM proxy (Claude, Gemini, GPT, and more) |
| Embeddings | Configurable — any LiteLLM proxy model or direct AWS Bedrock (1024-dim, set via Admin UI or env) |
| Document vectors | ChromaDB |
| TTS | OpenAI, AWS Polly, ElevenLabs |
| TTS | OpenAI (direct), AWS Polly, ElevenLabs, Google Cloud TTS |
| Queue | Celery + Redis |
| Email | SMTP (smtp2go) |
| Email | SMTP (smtp2go or any SMTP server) |
## Quick Start
@ -52,16 +54,19 @@ SECRET_KEY=<random-32-char-string>
# Redis
REDIS_URL=redis://redis:6379/0
# LLM (for question extraction)
LITELLM_MODEL=openai/claude-haiku-4.5
# LLM — for question extraction (requires LiteLLM proxy or direct OpenAI)
LITELLM_MODEL=openai/claude-haiku-4.5 # prefix with openai/ when using proxy
LITELLM_API_KEY=<your-litellm-or-openai-key>
LITELLM_API_BASE=https://your-litellm-proxy.com # or leave empty for direct OpenAI
LITELLM_EMBEDDING_MODEL=ge-gemini-embedding-001 # model name as proxy knows it, no prefix needed
LITELLM_API_BASE=https://your-litellm-proxy.com # leave empty for direct OpenAI
# OpenAI (for TTS — uses api.openai.com directly, not proxy)
# Embedding model — use the model name exactly as your proxy lists it (no prefix needed)
# Can also be changed live via Admin → More settings without redeploying
LITELLM_EMBEDDING_MODEL=ge-gemini-embedding-001
# OpenAI (for TTS — calls api.openai.com directly, not the proxy)
OPENAI_API_KEY=<openai-api-key>
# AWS (for Polly TTS + Bedrock embedding fallback)
# AWS (for Polly TTS + optional direct Bedrock embedding fallback)
AWS_ACCESS_KEY_ID=<key>
AWS_SECRET_ACCESS_KEY=<secret>
AWS_REGION=us-east-1
@ -90,80 +95,102 @@ CHROMA_PERSIST_DIR=/app/chroma_data
## Rebuild & Restart
Frontend and backend are built into Docker images — code changes require a `build` before they take effect. `.env` changes only need a `restart`.
```bash
# Rebuild and restart everything
docker compose build && docker compose up -d
# Rebuild and restart a single service (backend, frontend, or celery)
# Rebuild a single service
docker compose build backend && docker compose up -d backend
docker compose build frontend && docker compose up -d frontend
docker compose build celery && docker compose up -d celery
# Restart without rebuilding (picks up .env changes, not code changes)
# Restart without rebuilding (for .env changes only)
docker compose restart backend
docker compose restart frontend
# View logs
docker compose logs backend --tail=50
docker compose logs celery --tail=50
```
> **Note:** Frontend and backend are built into Docker images — code changes require a `build` before they take effect. Only `.env` changes and volume-mounted data (uploads, chroma, postgres) are picked up by a plain `restart`.
## Admin Dashboard
Accessible at `/admin` for admin users. Three tabs:
### AI Models
- **Search models** from your LiteLLM proxy — click any result to pre-fill the add form
- Configure models per task: `extraction` (PDF → questions), `tts` (voices), `general`
- Set a default model per task; enable/disable individual models
- Extraction models from the proxy don't need an `openai/` prefix — the backend adds it automatically
### Users
- Create users directly (email auto-verified)
- Change user roles: admin / moderator / user
### More Settings
- **Public Registration** — enable/disable new user sign-ups
- **AWS Polly** — global enable/disable toggle for all Polly voices (individual voices still manageable in AI Models tab)
- **Embedding Model** — set the model used for semantic search vectors:
- Type a model name and click **Save**, or click **Search LiteLLM** to browse proxy models
- Click **Test** to verify the model works and returns the correct dimensions (must be 1024)
- Setting is stored in Redis and takes effect immediately — no restart needed
- Priority: Admin UI setting → `LITELLM_EMBEDDING_MODEL` env → direct AWS Bedrock fallback
- Model name should match exactly what your proxy lists (no prefix required)
#### Switching embedding models
To switch to a different embedding model:
1. Go to Admin → More → click **Search LiteLLM**, find your model, click **Select**
2. Click **Test** to confirm it returns 1024 dimensions
3. Run `docker compose exec backend python manage.py reembed` to regenerate all existing question embeddings with the new model
To revert to AWS Bedrock (when available):
- Set model to the Bedrock model ID as configured on your proxy, or
- Clear the Redis key to fall back to env: `docker compose exec redis redis-cli DEL settings:embedding_model`
- Then set `LITELLM_EMBEDDING_MODEL=` to empty in `.env` to use direct Bedrock
## CLI Management
All commands run inside the backend container:
```bash
# ── User management ──────────────────────────────────────────────────────────
# Reset a locked-out admin password
docker compose exec backend python manage.py reset-password admin@example.com NewPassword123
# List all users with email verification status
docker compose exec backend python manage.py list-users
# ── Quiz extraction ───────────────────────────────────────────────────────────
# 1. Find your document ID and section ID
# 1. Find document and section IDs
docker compose exec backend python manage.py list-sections
# Output example:
# Doc 3: prep-PREP2012.pdf (ready, 767 pages)
# Section 6: 'ALL' pages 1767
# Doc 4: prep-PREP2013.pdf (ready, 227 pages)
# Section 7: 'Questions 1-100' pages 1100
# 2a. Extract in background (Celery) — returns immediately, monitor via navbar badge
# 2a. Extract in background (monitor via navbar jobs badge)
docker compose exec backend python manage.py extract 6 --bg
docker compose exec backend python manage.py extract 6 --bg --title "PREP 2012 Full" --mode timed
# 2b. Extract inline (blocking) — shows live output in terminal
# 2b. Extract inline (blocking, live output in terminal)
docker compose exec backend python manage.py extract 6
# 3. Check job status (shows progress, skipped questions, errors)
# 3. Check job status
docker compose exec backend python manage.py jobs
docker compose exec backend python manage.py jobs --user admin@example.com
# CLI extract options:
# --title "My Quiz" Custom quiz title (default: auto-generated from section name)
# --title "My Quiz" Custom quiz title
# --mode timed|learning Quiz mode (default: timed)
# --user email Which user owns the quiz (default: first admin)
# --user email Owner of the quiz (default: first admin)
# --bg Run in background via Celery
# ── Embeddings ───────────────────────────────────────────────────────────────
# Regenerate all question embeddings (e.g. after switching embedding model)
# Regenerate all question embeddings (run after switching embedding model)
docker compose exec backend python manage.py reembed
```
### How extraction works
1. **Upload PDF** via the web UI (Upload PDF page) — the system extracts text and stores it
2. **Create a section** on the document page (define page range, e.g. pages 1767)
3. **Extract quiz** — either from the web UI or CLI:
- The system auto-detects the PDF format:
- **Inline answers** (PREP 2012): "Correct Answer: X" after each question → standard extraction
- **Separate answer key** (PREP 2013): "Preferred Response: X" in a dedicated answer section → two-phase extraction (questions first, then answer key, then matched)
1. **Upload PDF** via the web UI — text is extracted and stored
2. **Create a section** on the document page (define page range)
3. **Extract quiz** from the web UI or CLI:
- Large sections are split into 50-page chunks automatically
- Progress shown live in the web UI extraction panel
- Progress shown live in the web UI; running jobs can be cancelled from the Extraction Jobs page
- Supports multiple extraction modes: standard, two-step (separate answer key), questions-only, regex, AI-decides
4. Questions land in the **Question Bank** and can be assigned to categories
## Architecture
@ -175,30 +202,41 @@ Browser
Nginx (frontend + API proxy)
├─► React SPA (static)
└─► FastAPI backend
├─ PostgreSQL (pgvector) ← users, quizzes, questions + embeddings
├─ ChromaDB ← document page chunks for quiz generation
├─ Redis ← Celery task queue
├─ PostgreSQL (pgvector) ← users, quizzes, questions + 1024-dim embeddings
├─ ChromaDB ← document page chunks for semantic search
├─ Redis ← Celery queue + runtime settings (embedding model, toggles)
├─ Celery workers ← background PDF processing, emails
├─ LiteLLM proxy ← Claude/Gemini/GPT for extraction + embeddings
├─ AWS Bedrock ← Polly TTS, Titan embed fallback
├─ LiteLLM proxy ← Claude/Gemini/GPT for extraction; embedding models
├─ AWS Bedrock ← Polly TTS; embedding fallback
└─ OpenAI ← TTS (direct, not via proxy)
```
### Embeddings
Question embeddings are 1024-dimensional vectors stored in PostgreSQL via pgvector with an HNSW index for fast cosine similarity search. The embedding model is called **directly via the LiteLLM proxy HTTP API** (not the Python library) so the `dimensions=1024` parameter is forwarded correctly.
Priority chain:
1. Model set in Admin UI (stored in Redis `settings:embedding_model`)
2. `LITELLM_EMBEDDING_MODEL` env var
3. Direct AWS Bedrock (`amazon.titan-embed-text-v2:0`) — automatic fallback if AWS credentials are present
### Search
Quiz search uses **hybrid retrieval**:
1. **Semantic** — embed the query with Titan Embed V2, cosine similarity against all questions via pgvector HNSW index
Quiz search uses hybrid retrieval:
1. **Semantic** — embed the query, cosine similarity via pgvector HNSW index
2. **Keyword** — PostgreSQL `ILIKE` on question text and options
3. Results merged and ranked — semantic matches shown first by score, keyword-only matches appended
3. Results merged — semantic matches ranked first by score, keyword-only matches appended
### TTS Providers
| Provider | Model IDs | Key Needed |
| Provider | Model ID format | Key needed |
|---|---|---|
| OpenAI | `tts-1:alloy`, `tts-1:nova`, `tts-1:echo`, `tts-1:shimmer`, `tts-1:onyx`, `tts-1:fable`, `tts-1-hd:*` | `OPENAI_API_KEY` |
| OpenAI | `tts-1:alloy`, `tts-1:nova`, `tts-1:echo`, `tts-1:shimmer`, `tts-1:onyx`, `tts-1:fable`, `tts-1-hd:*` | `OPENAI_API_KEY` (calls api.openai.com directly) |
| AWS Polly | `polly/Joanna`, `polly/Matthew`, `polly/Amy`, `polly/Brian` | `AWS_ACCESS_KEY_ID` + `polly:SynthesizeSpeech` IAM permission |
| ElevenLabs | `elevenlabs/<voice-id>` | `ELEVENLABS_API_KEY` |
| Google Cloud | `google/<voice-name>` | `GOOGLE_TTS_API_KEY` |
| Google Cloud | `google/<voice-name>` e.g. `google/en-US-Wavenet-D` | `GOOGLE_TTS_API_KEY` |
AWS Polly can be globally disabled/enabled via Admin → More settings without removing the individual voice configs.
## Project Structure
@ -206,23 +244,26 @@ Quiz search uses **hybrid retrieval**:
├── backend/
│ ├── app/
│ │ ├── main.py # App startup, seeding, pgvector setup
│ │ ├── config.py # Settings (pydantic-settings)
│ │ ├── models/ # SQLAlchemy models
│ │ ├── config.py # Settings (pydantic-settings, reads .env)
│ │ ├── models/ # SQLAlchemy ORM models
│ │ ├── routers/ # FastAPI route handlers
│ │ ├── services/
│ │ │ ├── ai_service.py # LLM extraction + TTS
│ │ │ ├── embedding_service.py # pgvector embeddings
│ │ │ ├── vector_service.py # ChromaDB (document pages)
│ │ │ ├── quiz_service.py # Quiz creation pipeline
│ │ │ └── email_service.py # Email templates + sending
│ │ │ ├── ai_service.py # LLM extraction + TTS routing
│ │ │ ├── embedding_service.py # pgvector embeddings (httpx → proxy)
│ │ │ ├── vector_service.py # ChromaDB document page chunks
│ │ │ ├── quiz_service.py # Quiz creation pipeline
│ │ │ └── email_service.py # Email templates + sending
│ │ ├── tasks/
│ │ │ ├── quiz_tasks.py # Celery: PDF extraction with cancellation support
│ │ │ └── pdf_tasks.py # Celery: PDF text extraction
│ │ └── utils/
│ ├── manage.py # CLI: reset-password, list-users, reembed
│ ├── requirements.txt
│ └── Dockerfile
├── frontend/
│ ├── src/
│ │ ├── pages/ # Dashboard, Quiz, Results, Settings, Search …
│ │ ├── components/ # Navbar, LineChart
│ │ ├── pages/ # All page components
│ │ ├── components/ # Navbar (with jobs badge), shared UI
│ │ └── context/ # AuthContext, ThemeContext
│ ├── nginx.conf
│ └── Dockerfile
@ -231,7 +272,8 @@ Quiz search uses **hybrid retrieval**:
## Deployment Notes
- The frontend Nginx only binds to `127.0.0.1:8081` — put a reverse proxy (Caddy/Nginx) in front for HTTPS
- PostgreSQL data is persisted in the `postgres_data` Docker volume — back it up regularly
- Uploads live in `uploads_data` volume — includes extracted question images
- Set `APP_URL` to your public domain so verification/reset email links work
- The frontend Nginx binds to `127.0.0.1:8081` — put Caddy or Nginx in front for HTTPS
- PostgreSQL data persists in the `postgres_data` Docker volume — back it up regularly
- Uploads live in the `uploads_data` volume — includes extracted question images
- Redis data persists in `redis_data` volume — holds runtime settings and job state
- Set `APP_URL` to your public domain so email verification and password reset links work