diff --git a/backend/scripts/rewrite_catalogue_summaries.py b/backend/scripts/rewrite_catalogue_summaries.py index 58468e0..f9b7fc7 100644 --- a/backend/scripts/rewrite_catalogue_summaries.py +++ b/backend/scripts/rewrite_catalogue_summaries.py @@ -55,13 +55,13 @@ from sqlalchemy import text as sa_text from app.database import SessionLocal -#: (article_id, first 40 characters of the summary being replaced, new summary). +#: (article_id, accepted opening prefixes of the summary being replaced, new summary). REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 321, ( - 'Low blood glucose in infants and childre', - 'Hypoglycaemia in infants and children is', + 'Low blood glucose in infants and childre', + 'Hypoglycaemia in infants and children is', ), 'Hypoglycemia in infants and children is a blood glucose below 60 mg/dL, ' 'causing autonomic shakiness and sweating or neuroglycopenic confusion and ' @@ -72,8 +72,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 322, ( - '[[356|Cryptorchidism]]: epidemiology, ev', - 'Undescended testis ([[356|cryptorchidism', + '[[356|Cryptorchidism]]: epidemiology, ev', + 'Undescended testis ([[356|cryptorchidism', ), 'Undescended testis ([[356|cryptorchidism]]) is the most common congenital ' 'anomaly of the male genitourinary tract, affecting 1-4% of full-term and up to ' @@ -85,8 +85,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 324, ( - 'Pediatric nasal fractures: recognizing s', - 'Nasal fracture is the most common facial', + 'Pediatric nasal fractures: recognizing s', + 'Nasal fracture is the most common facial', ), 'Nasal fracture is the most common facial bone injury in children, typically ' 'from sports, falls or abuse, and presents with epistaxis, edema and ecchymosis ' @@ -98,8 +98,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 327, ( - 'Pediatric blunt splenic injury: mechanis', - 'Blunt trauma causes most paediatric sple', + 'Pediatric blunt splenic injury: mechanis', + 'Blunt trauma causes most paediatric sple', ), 'Blunt trauma causes most pediatric splenic injury, with motor vehicle ' 'collisions accounting for about 40% and pre-existing splenomegaly raising ' @@ -110,8 +110,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 331, ( - 'Epiglottitis/supraglottitis: the abrupt ', - 'Epiglottitis is a rapidly progressive, l', + 'Epiglottitis/supraglottitis: the abrupt ', + 'Epiglottitis is a rapidly progressive, l', ), 'Epiglottitis is a rapidly progressive, life-threatening inflammation of the ' 'supraglottis, peaking at 1-8 years and presenting abruptly with drooling, ' @@ -122,8 +122,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 333, ( - 'Metabolic syndrome as cardiometabolic ri', - 'Metabolic syndrome is a cluster of cardi', + 'Metabolic syndrome as cardiometabolic ri', + 'Metabolic syndrome is a cluster of cardi', ), 'Metabolic syndrome is a cluster of cardiometabolic risk factors — central ' 'obesity, raised blood pressure and triglycerides, low HDL and hyperglycemia — ' @@ -134,8 +134,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 337, ( - 'Pediatric thyroid nodules: why they carr', - 'Thyroid nodules are found in only 1-2% o', + 'Pediatric thyroid nodules: why they carr', + 'Thyroid nodules are found in only 1-2% o', ), 'Thyroid nodules are found in only 1-2% of children but carry a 20-25% ' 'malignancy risk, roughly double that in adults, and are twice as common in ' @@ -146,8 +146,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 338, ( - 'The general approach to a child with a s', - 'Toxic ingestion follows a bimodal age di', + 'The general approach to a child with a s', + 'Toxic ingestion follows a bimodal age di', ), 'Toxic ingestion follows a bimodal age distribution, with accidental ' 'exploratory swallowing peaking at 1-4 years and intentional overdose in ' @@ -159,8 +159,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 339, ( - 'Tinea capitis: T. tonsurans vs M. canis ', - 'Tinea capitis is a dermatophyte infectio', + 'Tinea capitis: T. tonsurans vs M. canis ', + 'Tinea capitis is a dermatophyte infectio', ), 'Tinea capitis is a dermatophyte infection of the scalp and hair shafts, the ' 'most common cutaneous mycosis in children, with a prevalence of 3-13% and a ' @@ -171,8 +171,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 341, ( - 'Congenital and acquired toxoplasmosis: t', - 'Congenital toxoplasmosis follows materna', + 'Congenital and acquired toxoplasmosis: t', + 'Congenital toxoplasmosis follows materna', ), 'Congenital toxoplasmosis follows maternal Toxoplasma gondii infection in about ' '0.1-0.5% of pregnancies and affects roughly 1 in 3,000-10,000 live births, ' @@ -184,8 +184,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 343, ( - 'Pediatric visual impairment: acuity-base', - 'Severe visual impairment in children mea', + 'Pediatric visual impairment: acuity-base', + 'Severe visual impairment in children mea', ), 'Severe visual impairment in children means corrected acuity poorer than 6/60, ' 'with an incidence of about 2.5 per 100,000 and a peak in the first year of ' @@ -196,8 +196,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 347, ( - 'Pediatric acute pancreatitis: the 2-of-3', - 'Acute pancreatitis in children is diagno', + 'Pediatric acute pancreatitis: the 2-of-3', + 'Acute pancreatitis in children is diagno', ), 'Acute pancreatitis in children is diagnosed on two of three criteria — ' 'epigastric pain, amylase or lipase at least three times normal, and consistent ' @@ -208,8 +208,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 353, ( - 'Pediatric cellulitis: exposure-based pat', - 'Cellulitis is an acute infection of the ', + 'Pediatric cellulitis: exposure-based pat', + 'Cellulitis is an acute infection of the ', ), 'Cellulitis is an acute infection of the dermis and subcutaneous tissue ' 'producing erythema, edema, warmth and pain with poorly defined borders, most ' @@ -221,8 +221,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 355, ( - 'Chorioamnionitis / Triple I: clinical di', - 'Chorioamnionitis, now called intrauterin', + 'Chorioamnionitis / Triple I: clinical di', + 'Chorioamnionitis, now called intrauterin', ), 'Chorioamnionitis, now called intrauterine inflammation or infection at birth, ' 'follows microbial invasion of amniotic fluid after membranes rupture for 18 ' @@ -234,8 +234,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 357, ( - 'Pediatric chronic sinusitis: the 90-day ', - 'Chronic sinusitis is cough, nasal discha', + 'Pediatric chronic sinusitis: the 90-day ', + 'Chronic sinusitis is cough, nasal discha', ), 'Chronic sinusitis is cough, nasal discharge or congestion persisting beyond 90 ' 'days, milder and more indolent than acute disease, with fever uncommon and ' @@ -246,8 +246,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 360, ( - 'Pediatric dilated cardiomyopathy: age-de', - 'Dilated cardiomyopathy is the commonest ', + 'Pediatric dilated cardiomyopathy: age-de', + 'Dilated cardiomyopathy is the commonest ', ), 'Dilated cardiomyopathy is the most common cardiomyopathy in children, ' 'affecting about 4-8 per 100,000 each year, and 71% present in congestive heart ' @@ -259,8 +259,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 362, ( - 'Exercise-induced bronchoconstriction: th', - 'Exercise-induced bronchoconstriction is ', + 'Exercise-induced bronchoconstriction: th', + 'Exercise-induced bronchoconstriction is ', ), 'Exercise-induced bronchoconstriction is transient airway narrowing triggered ' 'by exertion, affecting an estimated 40-90% of children with asthma, with ' @@ -272,8 +272,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 364, ( - 'Fetal alcohol syndrome within the FASD s', - 'Fetal alcohol syndrome is the most sever', + 'Fetal alcohol syndrome within the FASD s', + 'Fetal alcohol syndrome is the most sever', ), 'Fetal alcohol syndrome is the most severe diagnosis within fetal alcohol ' 'spectrum disorder, affecting about 0.5-2 per 1,000 live births, and requires ' @@ -285,8 +285,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 366, ( - 'Fragile X syndrome: the FMR1 CGG-repeat ', - 'Fragile X syndrome is the commonest inhe', + 'Fragile X syndrome: the FMR1 CGG-repeat ', + 'Fragile X syndrome is the commonest inhe', ), 'Fragile X syndrome is the most common inherited cause of intellectual ' 'disability, caused by a CGG repeat expansion beyond 200 in FMR1 that silences ' @@ -297,8 +297,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 369, ( - 'Pediatric glomerulonephritis: the nephri', - 'Glomerulonephritis presents as nephritic', + 'Pediatric glomerulonephritis: the nephri', + 'Glomerulonephritis presents as nephritic', ), 'Glomerulonephritis presents as nephritic syndrome — gross hematuria, red cell ' 'casts, hypertension and edema — with acute post-streptococcal disease the most ' @@ -310,8 +310,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 370, ( - 'Pediatric alopecia: distinguishing [[346', - 'Acquired localised hair loss is the comm', + 'Pediatric alopecia: distinguishing [[346', + 'Acquired localised hair loss is the comm', ), 'Acquired localized hair loss is the most common pattern in childhood and is ' 'nearly always [[346|alopecia areata]], [[339|tinea capitis]] or traumatic ' @@ -323,12 +323,12 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 371, ( - 'Seasonal [[298|influenza]] A infection i', - '[[298|Influenza]] A causes seasonal wint', + 'Seasonal [[298|influenza]] A infection i', + '[[298|Influenza]] A causes seasonal wint', ), '[[298|Influenza]] A causes seasonal winter epidemics, with antigenic drift in ' 'its hemagglutinin and neuraminidase driving new strains and an annually ' - 'updated vaccine, and hospitalisation is highest under 2 years. Older children ' + 'updated vaccine, and hospitalization is highest under 2 years. Older children ' 'get sudden fever, myalgia and headache while infants may present with ' 'diarrhea, vomiting or a sepsis-like illness, and aspirin must be avoided ' 'because of Reye syndrome.', @@ -336,8 +336,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 372, ( - 'Pediatric HIV: transmission routes, earl', - 'Paediatric HIV is acquired mostly from a', + 'Pediatric HIV: transmission routes, earl', + 'Paediatric HIV is acquired mostly from a', ), 'Pediatric HIV is acquired mostly from an infected mother before, during or ' 'after birth, and about 20% of untreated infants present in the first 3-6 ' @@ -349,8 +349,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 375, ( - 'Pediatric IIH/pseudotumor cerebri: the n', - 'Idiopathic intracranial hypertension is ', + 'Pediatric IIH/pseudotumor cerebri: the n', + 'Idiopathic intracranial hypertension is ', ), 'Idiopathic intracranial hypertension is raised intracranial pressure with ' 'normal parenchyma, CSF and neuroimaging, affecting 1-2 per 100,000 children ' @@ -361,8 +361,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 377, ( - 'Pediatric insomnia: behavioral insomnia ', - 'Insomnia is difficulty falling or stayin', + 'Pediatric insomnia: behavioral insomnia ', + 'Insomnia is difficulty falling or stayin', ), 'Insomnia is difficulty falling or staying asleep despite adequate opportunity, ' 'causing daytime fatigue and irritability, and behavioral insomnia of childhood ' @@ -374,8 +374,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 379, ( - 'Intracranial hemorrhage across the pedia', - 'Intracranial haemorrhage is the commones', + 'Intracranial hemorrhage across the pedia', + 'Intracranial haemorrhage is the commones', ), 'Intracranial hemorrhage is the most common acute CNS complication of preterm ' 'birth, arising from the subependymal germinal matrix, with risk rising as ' @@ -387,8 +387,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 381, ( - 'Juvenile dermatomyositis: the Bohan-Pete', - 'Juvenile dermatomyositis is the commones', + 'Juvenile dermatomyositis: the Bohan-Pete', + 'Juvenile dermatomyositis is the commones', ), 'Juvenile dermatomyositis is the most common pediatric inflammatory myopathy, ' 'affecting roughly 3.2 per million children, with onset at a median 7-11 years ' @@ -400,8 +400,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 383, ( - 'Pediatric laceration management: hemosta', - 'Lacerations in children involve the face', + 'Pediatric laceration management: hemosta', + 'Lacerations in children involve the face', ), 'Lacerations in children involve the face in about 60% of cases and the upper ' 'extremities in 25%, and most are managed with direct pressure, LET topical ' @@ -412,8 +412,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 385, ( - 'Laryngomalacia: the omega-shaped epiglot', - 'Laryngomalacia is the commonest congenit', + 'Laryngomalacia: the omega-shaped epiglot', + 'Laryngomalacia is the commonest congenit', ), 'Laryngomalacia is the most common congenital laryngeal anomaly and the leading ' 'cause of infant stridor, appearing at 2-6 weeks with inspiratory stridor that ' @@ -424,8 +424,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 387, ( - 'Pediatric metabolic acidosis: distinguis', - 'Metabolic acidosis follows a net gain of', + 'Pediatric metabolic acidosis: distinguis', + 'Metabolic acidosis follows a net gain of', ), 'Metabolic acidosis follows a net gain of hydrogen ions or loss of bicarbonate, ' 'acutely from diarrhea, shock or diabetic ketoacidosis and chronically from ' @@ -437,8 +437,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 391, ( - 'Oligohydramnios and the Potter sequence:', - 'Oligohydramnios is a maximum vertical po', + 'Oligohydramnios and the Potter sequence:', + 'Oligohydramnios is a maximum vertical po', ), 'Oligohydramnios is a maximum vertical pocket of amniotic fluid under 2 cm, ' 'most often from ruptured membranes but also from placental insufficiency or ' @@ -450,8 +450,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 393, ( - 'Peanut allergy prevention and management', - 'Peanut allergy affects 1-3% of children ', + 'Peanut allergy prevention and management', + 'Peanut allergy affects 1-3% of children ', ), 'Peanut allergy affects 1-3% of children in westernized countries, has tripled ' 'in 10-15 years, and is outgrown by only about 20%, almost always before age 5. ' @@ -463,20 +463,20 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 396, ( - 'Pediatric pneumothorax: spontaneous (pri', - 'Pneumothorax is air in the pleural space', + 'Pediatric pneumothorax: spontaneous (pri', + 'Pneumothorax is air in the pleural space', ), 'Pneumothorax is air in the pleural space and is more common in the neonatal ' 'period than at any other age, affecting 1-2% of term and about 6% of preterm ' - 'newborns. In older children it is either primary spontaneous, in tall thin ' + 'newborns. In older children it is primary spontaneous, in tall thin ' 'adolescent boys with apical blebs, or secondary to asthma, cystic fibrosis or ' 'trauma, and tension physiology needs immediate needle decompression.', ), ( 398, ( - 'Pediatric polytrauma: unique anatomic/ph', - 'Polytrauma is injury to several body reg', + 'Pediatric polytrauma: unique anatomic/ph', + 'Polytrauma is injury to several body reg', ), 'Polytrauma is injury to several body regions needing multiple specialties, and ' 'trauma is the leading cause of childhood death in the developed world, with ' @@ -488,8 +488,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 399, ( - 'Posterior urethral valves: presentation ', - 'Posterior urethral valves are obstructin', + 'Posterior urethral valves: presentation ', + 'Posterior urethral valves are obstructin', ), 'Posterior urethral valves are obstructing leaflets in the prostatic urethra of ' 'boys and the most common cause of lower urinary tract obstruction and of ' @@ -501,8 +501,8 @@ REWRITES: list[tuple[int, tuple[str, str], str]] = [ ( 404, ( - 'Prepubertal vulvovaginitis: why unestrog', - 'About 75% of prepubertal vulvovaginitis ', + 'Prepubertal vulvovaginitis: why unestrog', + 'About 75% of prepubertal vulvovaginitis ', ), 'About 75% of prepubertal vulvovaginitis is nonspecific, driven by thin ' 'unestrogenized alkaline mucosa, an unprotected introitus and the anus lying '