haiku.rag/haiku_rag_slim/haiku/rag/mcp.py
Yiorgis Gozadinos 4b1ec096c6
One error contract for the MCP server
Every failure reaches the client as an MCP error carrying its message;
mask_error_details is set off explicitly, since FastMCP also reads it from
the environment. The masking goes, and with it the filter pre-check that
ran a count before every filtered call and the UnknownDatabaseError
translations that existed only to survive it. Explicit domain errors stay.
2026-09-07 13:14:16 +03:00

460 lines
18 KiB
Python

import asyncio
import base64
from collections.abc import AsyncIterator
from contextlib import AsyncExitStack, asynccontextmanager
from importlib import metadata
from pathlib import Path
from typing import TYPE_CHECKING, Annotated
from fastmcp import FastMCP
from fastmcp.exceptions import ToolError
from fastmcp.tools import ToolResult
from mcp.types import ContentBlock, ImageContent, TextContent, ToolAnnotations
from pydantic import Field
from haiku.rag.client import HaikuRAG
from haiku.rag.config import AppConfig, get_config
from haiku.rag.context import build_toc
from haiku.rag.sandbox import AnalysisContext, Sandbox, recovery_hint
from haiku.rag.store.models import Document, SearchResult
from haiku.rag.store.schema import DocumentMetaRecord
from haiku.rag.tools.document import DocumentInfo, DocumentSection, OutlineNode
from haiku.rag.tools.search import collect_pictures
if TYPE_CHECKING:
from typing import Any
from haiku.rag.client.scope import DatabaseScope
from haiku.rag.store.models.document_item import DocumentItem
_FILTER_COLUMNS = ", ".join(DocumentMetaRecord.model_fields)
Filter = Annotated[
str | None,
Field(
description=(
f"SQL WHERE clause over the document columns {_FILTER_COLUMNS}, "
"restricting which documents are used. `metadata` is a JSON string, "
'so match its keys with LIKE: metadata LIKE \'%"author": "Smith"%\'. '
"Also uri LIKE '%.pdf', title = 'Q3 report'."
)
),
]
Sources = Annotated[
list[str] | None,
Field(description="Collections to use, by name. All of them by default."),
]
def _read_only(title: str) -> ToolAnnotations:
return ToolAnnotations(title=title, read_only_hint=True, open_world_hint=False)
def _decode_image(image_base64: str) -> bytes:
try:
return base64.b64decode(image_base64, validate=True)
except ValueError as e:
# binascii.Error for characters outside the alphabet or bad padding,
# ValueError itself for non-ASCII input.
raise ToolError("Invalid base64 image") from e
def _instructions(scope: "DatabaseScope", config: AppConfig) -> str:
"""What the server is for, naming no tools: the client has every tool's
description from the listing."""
lines = [
"haiku-rag is the user's knowledge base: documents they ingested, "
"searchable by meaning and keyword, readable whole or section by section, "
"or computed across with code."
]
lines.append(
"Use it whenever a question could be answered from those documents, "
"before answering from memory, and say when it had nothing relevant."
)
if scope.covers_multiple:
lines.append(
f"It holds several collections: {', '.join(scope.names)}. Results "
"name theirs in `source`; pass `sources` to use a subset."
)
if config.prompts.domain_preamble:
lines.append(config.prompts.domain_preamble)
return "\n".join(lines)
def _search_result(results: list[SearchResult], covers_multiple: bool) -> ToolResult:
"""Results as the in-process agents read them, plus the matched chunk's
metadata, then each distinct picture as an image block labelled with its
result. No structured content: a client given both shows the model the
JSON and drops the text, or shows both."""
total = len(results)
text = "\n\n".join(
result.format_for_agent(
rank=rank,
total=total,
include_collection=covers_multiple,
include_document_id=True,
include_chunk_meta=True,
)
for rank, result in enumerate(results, 1)
)
content: list[ContentBlock] = [
TextContent(type="text", text=text or "No results found.")
]
pictures, _ = collect_pictures(results)
for source, chunk_id, self_ref, picture in pictures:
collection = f" in {source}" if covers_multiple and source else ""
content.append(
TextContent(
type="text",
text=f"Picture {self_ref} of search result [{chunk_id}]{collection}",
)
)
content.append(
ImageContent(
type="image",
data=base64.b64encode(picture.data).decode("ascii"),
mime_type="image/png",
)
)
return ToolResult(content=content)
def _node(toc: "dict[str, Any]") -> OutlineNode:
return OutlineNode(
id=toc["self_ref"],
title=toc["title"],
level=toc["level"],
page_numbers=toc["page_numbers"],
children=[_node(child) for child in toc["children"]],
)
def _find(toc: list["dict[str, Any]"], section_id: str) -> "dict[str, Any] | None":
for node in toc:
if node["self_ref"] == section_id:
return node
found = _find(node["children"], section_id)
if found is not None:
return found
return None
def create_mcp_server(
db_path: Path | None = None, config: AppConfig | None = None
) -> FastMCP:
"""Create an MCP server over the databases the configuration places.
Args:
db_path: Path to the database file, where `config` places none; or
None to serve the databases the configuration places. Beside
`lancedb.databases` a path raises `AmbiguousDatabaseError`.
config: Configuration to use.
"""
from haiku.rag.client.scope import DatabaseScope
config = config if config is not None else get_config()
return _covering(DatabaseScope.resolve(config, database_path=db_path), config)
def _covering(scope: "DatabaseScope", config: AppConfig) -> FastMCP:
"""An MCP server over databases someone already resolved.
Internal, as ``HaikuRAG._covering`` is: the public factory takes a path and
resolves it, which is its own job. A caller that resolved already passes the
scope, so the configured name survives, which results carry as ``source``.
"""
client: HaikuRAG | None = None
stack = AsyncExitStack()
client_lock = asyncio.Lock()
async def _client() -> HaikuRAG:
"""The server's client, opened once.
Opening cost is per connection, and on object storage the first vector
query loads the index into the session cache, so a client per tool call
pays that repeatedly.
"""
nonlocal client
async with client_lock:
if client is None:
client = await stack.enter_async_context(
HaikuRAG._covering(scope, config, read_only=True)
)
return client
@asynccontextmanager
async def lifespan(_server: FastMCP) -> AsyncIterator[None]:
# Opened eagerly: an unopenable database fails at startup.
nonlocal client
await _client()
try:
yield
finally:
# The lifespan can be re-entered; without the reset the next cycle
# hands out the closed client, including when aclose itself fails.
try:
await stack.aclose()
finally:
client = None
# Explicit: the setting is also read from the environment, and the contract
# is that every failure reaches the client with its message.
mcp = FastMCP(
"haiku-rag",
instructions=_instructions(scope, config),
version=metadata.version("haiku.rag-slim"),
lifespan=lifespan,
mask_error_details=False,
)
@mcp.tool(annotations=_read_only("Search documents"))
async def search_documents(
query: str,
limit: int | None = None,
include_images: bool = True,
filter: Filter = None,
sources: Sources = None,
) -> ToolResult:
"""Search the knowledge base by meaning and keyword.
Use this first for any question the documents might answer; it needs
no model and is the cheapest call. Results come best first, each with
its rank, `Document ID`, `Collection` when the server covers several,
the document title, section headings, the matched chunk's metadata
when it has any, and the matching passage expanded to its section;
pass the id and collection to the document tools. Pictures in the
results follow as images, each labelled with its result. Ranks, not scores,
are the signal: scores are not comparable across queries. If nothing
relevant comes back, rephrase once or narrow with `filter` before
concluding the material is absent.
Args:
query: What to look for, in natural language or keywords.
limit: How many results to return; the server's configured default
when omitted.
include_images: Return the pictures in the results as images.
False for a smaller response.
"""
rag = await _client()
results = await rag.search(
query,
limit=limit,
filter=filter,
include_images=include_images,
sources=sources,
)
return _search_result(await rag.expand_context(results), rag.covers_multiple)
# Image-as-query tool, only registered when the configured embedder
# supports image embeddings. Probed at server-build time when no Store is
# open, so there is no cached embedder to read; this is the one place
# outside Store that builds one.
from haiku.rag.embeddings import get_embedder
if get_embedder(config).supports_images:
@mcp.tool(annotations=_read_only("Search documents by image"))
async def search_documents_by_image(
image_base64: str,
limit: int | None = None,
include_images: bool = True,
filter: Filter = None,
sources: Sources = None,
) -> ToolResult:
"""Search the knowledge base with an image as the query.
Use this when the question is about a picture rather than words.
The image is embedded and matched against document text and
figures by vector similarity alone. Results have the shape of
`search_documents` results.
Args:
image_base64: The query image, PNG or JPEG bytes as base64.
limit: How many results to return; the server's configured
default when omitted.
include_images: Return the pictures in the results as images.
False for a smaller response.
"""
raw = _decode_image(image_base64)
rag = await _client()
results = await rag.search(
raw,
limit=limit,
filter=filter,
include_images=include_images,
sources=sources,
)
return _search_result(
await rag.expand_context(results), rag.covers_multiple
)
@mcp.tool(annotations=_read_only("Get document"))
async def get_document(document_id: str, source: str | None = None) -> Document:
"""Read one document whole, in reading order.
Use this after a search when a passage is not enough. Returns the
document's content, title, uri and metadata. Ids come from search
results and `list_documents`.
Args:
document_id: The document's id.
source: The collection holding it. Without one every collection
is asked.
"""
rag = await _client()
document = await rag.get_document_by_id(document_id, source)
if document is None:
raise ToolError(f"No document with id {document_id!r}")
return document
async def _items_of(document_id: str, source: str | None) -> list["DocumentItem"]:
"""A document's items in reading order, from the database holding it."""
rag = await _client()
document = await rag.get_document_by_id(document_id, source)
if document is None:
raise ToolError(f"No document with id {document_id!r}")
owner = await rag.reader_for(source or document.source)
assert owner is not None, "a stored document names its database"
return await owner.document_item_repository.get_all_items(document_id)
@mcp.tool(annotations=_read_only("Document outline"))
async def get_document_outline(
document_id: str, source: str | None = None
) -> list[OutlineNode]:
"""The heading tree of a document, with page numbers.
Use this on a long document to see its structure before reading, then
pass a node's `id` to `get_document_section`. Returns the headings
nested by level; an empty list means the document has no headings,
so read it with `get_document`.
Args:
document_id: The document's id.
source: The collection holding it. Without one every collection
is asked.
"""
return [
_node(toc) for toc in build_toc(await _items_of(document_id, source), {})
]
@mcp.tool(annotations=_read_only("Document section"))
async def get_document_section(
document_id: str, section_id: str, source: str | None = None
) -> DocumentSection:
"""The text of one section of a document, subsections included.
Use this to read a part of a long document instead of the whole.
`section_id` is a node `id` from `get_document_outline`. Returns the
section's heading, page numbers and text in reading order, up to the
next heading of the same or a higher level.
Args:
document_id: The document's id.
section_id: The `id` of a node in the document's outline.
source: The collection holding it. Without one every collection
is asked.
"""
items = await _items_of(document_id, source)
node = _find(build_toc(items, {}), section_id)
if node is None:
raise ToolError(f"No section {section_id!r} in document {document_id!r}")
start, end = node["item_range"]
ordered = sorted(items, key=lambda item: item.position)
return DocumentSection(
id=node["self_ref"],
title=node["title"],
page_numbers=node["page_numbers"],
content="\n\n".join(item.text for item in ordered[start:end] if item.text),
)
@mcp.tool(annotations=_read_only("List documents"))
async def list_documents(
limit: int | None = None,
offset: int | None = None,
filter: Filter = None,
) -> list[DocumentInfo]:
"""List what the knowledge base holds.
Use this to see which documents exist, their titles, URIs and
metadata, and so what a `filter` can match. Not a search: it returns
no passages.
Args:
limit: How many documents to return.
offset: How many documents to skip, for paging.
"""
rag = await _client()
documents = await rag.list_documents(limit, offset, filter)
return [
DocumentInfo(
id=doc.id,
title=doc.title or "Untitled",
uri=doc.uri or "",
created=doc.created_at.strftime("%Y-%m-%d"),
source=doc.source,
metadata=doc.metadata,
)
for doc in documents
]
@mcp.tool(annotations=_read_only("Run code over the documents"))
async def execute_code(
code: str, filter: Filter = None, sources: Sources = None
) -> str:
"""Run a Python program over the documents and return what it printed.
Use this when the answer is a count, an aggregate, a comparison across
many documents, a lookup by document or chunk metadata, or a pattern
over whole documents: whatever a search cannot rank. The program runs
in a sandboxed interpreter on the server. Each call is one program,
nothing carries over between calls, and `print` is the only output.
Inside the program, `/documents/{document_id}/` holds `metadata.json`
(id, title, uri, created_at, metadata), `content.txt` (the whole text),
`items.jsonl` (one item per line: self_ref, label, text, page_numbers,
heading_level, chunk_ids), `chunks.jsonl` (one chunk per line: chunk_id,
metadata) and `toc.json` (`doc_id`, `title`, `tree`; each node has
self_ref, level, title, page_numbers, item_range as a slice into
items.jsonl, chunk_ids and children; an empty tree means no headings).
Read files with `Path.read_text()` or `open()`; a file object cannot be
iterated, use `.readlines()`. `await search(query, limit=10)` returns
dicts with chunk_id, content, document_id, document_title, document_uri,
source, score, page_numbers, headings, doc_item_refs, labels,
picture_refs (the doc_item_refs that are pictures) and chunk_meta.
`await list_documents()` returns dicts with id, title, uri, created_at,
source and metadata. Both see the documents `filter` and `sources`
select. Useful modules include json, re, math, pathlib, datetime,
collections, itertools, functools and dataclasses; decimal and
statistics do not exist. No generator functions, match statements or
class inheritance.
Files are read-only, there is no network, a call has a time limit named
in the error when it is hit, and output past a size is truncated.
Map a title or URI to a document id with one `list_documents()` call
rather than reading every `metadata.json`. The files carry no `source`,
so over several collections group by the `source` of `list_documents()`
rows. For a known document's structure read its `toc.json` before
searching: `search()` ranks across every document. A hit's
`doc_item_refs` are `self_ref` values in `items.jsonl`, which places it
in its section. `chunk_ids` on items and `chunk_id` in `chunks.jsonl`
join the two files; they are not citations.
Args:
code: The program. Use `await` on search and list_documents.
"""
rag = await _client()
sandbox = Sandbox._covering(
scope, config, AnalysisContext(filter=filter, sources=sources), rag=rag
)
try:
result = await sandbox.execute(code)
finally:
await sandbox.close()
if not result.success:
raise ToolError(
f"{result.stderr}{recovery_hint(result.stderr)}"
f"\n\nOutput: {result.stdout}"
)
return result.stdout or "No output."
return mcp