haiku.rag/evaluations/benchmark.py

318 lines
11 KiB
Python

import asyncio
from collections.abc import Mapping
from typing import Any, cast
import logfire
import typer
from pydantic_ai.models.openai import OpenAIChatModel
from pydantic_ai.providers.ollama import OllamaProvider
from pydantic_evals import Dataset as EvalDataset
from pydantic_evals.evaluators import IsInstance, LLMJudge
from pydantic_evals.reporting import ReportCaseFailure
from rich.console import Console
from rich.progress import Progress
from evaluations.config import DatasetSpec, RetrievalSample
from evaluations.datasets import DATASETS
from evaluations.llm_judge import ANSWER_EQUIVALENCE_RUBRIC
from haiku.rag import logging # noqa: F401
from haiku.rag.client import HaikuRAG
from haiku.rag.config import Config
from haiku.rag.logging import configure_cli_logging
from haiku.rag.qa import get_qa_agent
QA_JUDGE_MODEL = "qwen3"
logfire.configure(send_to_logfire="if-token-present", service_name="evals")
logfire.instrument_pydantic_ai()
configure_cli_logging()
console = Console()
async def populate_db(spec: DatasetSpec) -> None:
spec.db_path.parent.mkdir(parents=True, exist_ok=True)
corpus = spec.document_loader()
if spec.document_limit is not None:
corpus = corpus.select(range(min(spec.document_limit, len(corpus))))
with Progress() as progress:
task = progress.add_task("[green]Populating database...", total=len(corpus))
async with HaikuRAG(spec.db_path) as rag:
for doc in corpus:
doc_mapping = cast(Mapping[str, Any], doc)
payload = spec.document_mapper(doc_mapping)
if payload is None:
progress.advance(task)
continue
existing = await rag.get_document_by_uri(payload.uri)
if existing is not None:
assert existing.id
chunks = await rag.chunk_repository.get_by_document_id(existing.id)
if chunks:
progress.advance(task)
continue
await rag.document_repository.delete(existing.id)
await rag.create_document(
content=payload.content,
uri=payload.uri,
title=payload.title,
metadata=payload.metadata,
)
progress.advance(task)
rag.store.vacuum()
def _is_relevant_match(retrieved_uri: str | None, sample: RetrievalSample) -> bool:
return retrieved_uri is not None and retrieved_uri in sample.expected_uris
async def run_retrieval_benchmark(spec: DatasetSpec) -> dict[str, float] | None:
if spec.retrieval_loader is None or spec.retrieval_mapper is None:
console.print("Skipping retrieval benchmark; no retrieval config.")
return None
corpus = spec.retrieval_loader()
recall_totals = {
1: 0.0,
3: 0.0,
5: 0.0,
}
total_queries = 0
with Progress() as progress:
task = progress.add_task(
"[blue]Running retrieval benchmark...", total=len(corpus)
)
async with HaikuRAG(spec.db_path) as rag:
for doc in corpus:
doc_mapping = cast(Mapping[str, Any], doc)
sample = spec.retrieval_mapper(doc_mapping)
if sample is None or sample.skip:
progress.advance(task)
continue
matches = await rag.search(query=sample.question, limit=5)
if not matches:
progress.advance(task)
continue
total_queries += 1
retrieved_uris: list[str] = []
for chunk, _ in matches:
if chunk.document_id is None:
continue
retrieved_doc = await rag.get_document_by_id(chunk.document_id)
if retrieved_doc and retrieved_doc.uri:
retrieved_uris.append(retrieved_doc.uri)
# Compute per-query recall@K by counting how many relevant
# documents are retrieved within the first K results and
# averaging these fractions across all queries.
for cutoff in (1, 3, 5):
top_k = set(retrieved_uris[:cutoff])
relevant = set(sample.expected_uris)
if relevant:
matched = len(top_k & relevant)
recall_totals[cutoff] += matched / len(relevant)
progress.advance(task)
if total_queries == 0:
console.print("No retrieval cases to evaluate.")
return None
recall_at_1 = recall_totals[1] / total_queries
recall_at_3 = recall_totals[3] / total_queries
recall_at_5 = recall_totals[5] / total_queries
console.print("\n=== Retrieval Benchmark Results ===", style="bold cyan")
console.print(f"Total queries: {total_queries}")
console.print(f"Recall@1: {recall_at_1:.4f}")
console.print(f"Recall@3: {recall_at_3:.4f}")
console.print(f"Recall@5: {recall_at_5:.4f}")
return {
"recall@1": recall_at_1,
"recall@3": recall_at_3,
"recall@5": recall_at_5,
}
async def run_qa_benchmark(
spec: DatasetSpec, qa_limit: int | None = None
) -> ReportCaseFailure[str, str, dict[str, str]] | None:
corpus = spec.qa_loader()
if qa_limit is not None:
corpus = corpus.select(range(min(qa_limit, len(corpus))))
cases = [
spec.qa_case_builder(index, cast(Mapping[str, Any], doc))
for index, doc in enumerate(corpus, start=1)
]
judge_model = OpenAIChatModel(
model_name=QA_JUDGE_MODEL,
provider=OllamaProvider(base_url=f"{Config.OLLAMA_BASE_URL}/v1"),
)
evaluation_dataset = EvalDataset[str, str, dict[str, str]](
cases=cases,
evaluators=[
IsInstance(type_name="str"),
LLMJudge(
rubric=ANSWER_EQUIVALENCE_RUBRIC,
include_input=True,
include_expected_output=True,
model=judge_model,
assertion={
"evaluation_name": "answer_equivalent",
"include_reason": True,
},
),
],
)
total_processed = 0
passing_cases = 0
failures: list[ReportCaseFailure[str, str, dict[str, str]]] = []
with Progress(console=console) as progress:
qa_task = progress.add_task(
"[yellow]Evaluating QA cases...",
total=len(evaluation_dataset.cases),
)
async with HaikuRAG(spec.db_path) as rag:
qa = get_qa_agent(rag)
async def answer_question(question: str) -> str:
return await qa.answer(question)
for case in evaluation_dataset.cases:
progress.console.print(f"\n[bold]Evaluating case:[/bold] {case.name}")
single_case_dataset = EvalDataset[str, str, dict[str, str]](
cases=[case],
evaluators=evaluation_dataset.evaluators,
)
report = await single_case_dataset.evaluate(
answer_question,
name="qa_answer",
max_concurrency=1,
progress=False,
)
total_processed += 1
if report.cases:
result_case = report.cases[0]
equivalence = result_case.assertions.get("answer_equivalent")
progress.console.print(f"Question: {result_case.inputs}")
progress.console.print(f"Expected: {result_case.expected_output}")
progress.console.print(f"Generated: {result_case.output}")
if equivalence is not None:
progress.console.print(
f"Equivalent: {equivalence.value}"
+ (f"{equivalence.reason}" if equivalence.reason else "")
)
if equivalence.value:
passing_cases += 1
progress.console.print("")
if report.failures:
failures.extend(report.failures)
failure = report.failures[0]
progress.console.print(
"[red]Failure encountered during case evaluation:[/red]"
)
progress.console.print(f"Question: {failure.inputs}")
progress.console.print(f"Error: {failure.error_message}")
progress.console.print("")
progress.console.print(
f"[green]Accuracy: {(passing_cases / total_processed):.4f} "
f"{passing_cases}/{total_processed}[/green]"
)
progress.advance(qa_task)
total_cases = total_processed
accuracy = passing_cases / total_cases if total_cases > 0 else 0
console.print("\n=== QA Benchmark Results ===", style="bold cyan")
console.print(f"Total questions: {total_cases}")
console.print(f"Correct answers: {passing_cases}")
console.print(f"QA Accuracy: {accuracy:.4f} ({accuracy * 100:.2f}%)")
if failures:
console.print("[red]\nSummary of failures:[/red]")
for failure in failures:
console.print(f"Case: {failure.name}")
console.print(f"Question: {failure.inputs}")
console.print(f"Error: {failure.error_message}")
console.print("")
return failures[0] if failures else None
async def evaluate_dataset(
spec: DatasetSpec,
skip_retrieval: bool,
skip_qa: bool,
qa_limit: int | None,
) -> None:
console.print(f"Using dataset: {spec.key}", style="bold magenta")
await populate_db(spec)
if not skip_retrieval:
console.print("Running retrieval benchmarks...", style="bold blue")
await run_retrieval_benchmark(spec)
else:
console.print("Skipping retrieval benchmark by request.")
if not skip_qa:
console.print("\nRunning QA benchmarks...", style="bold yellow")
await run_qa_benchmark(spec, qa_limit=qa_limit)
else:
console.print("Skipping QA benchmark by request.")
app = typer.Typer(help="Run retrieval and QA benchmarks for configured datasets.")
@app.command()
def run(
dataset: str = typer.Argument(..., help="Dataset key to evaluate."),
skip_retrieval: bool = typer.Option(
False, "--skip-retrieval", help="Skip retrieval benchmark."
),
skip_qa: bool = typer.Option(False, "--skip-qa", help="Skip QA benchmark."),
qa_limit: int | None = typer.Option(
None, "--qa-limit", help="Limit number of QA cases."
),
) -> None:
spec = DATASETS.get(dataset.lower())
if spec is None:
valid_datasets = ", ".join(sorted(DATASETS))
raise typer.BadParameter(
f"Unknown dataset '{dataset}'. Choose from: {valid_datasets}"
)
asyncio.run(
evaluate_dataset(
spec=spec,
skip_retrieval=skip_retrieval,
skip_qa=skip_qa,
qa_limit=qa_limit,
)
)
if __name__ == "__main__":
app()