haiku.rag/haiku_rag_slim/haiku/rag/store/schema.py
Yiorgis Gozadinos 629e1ba4ea
Split the store module by responsibility
engine.py held four unrelated things: what the tables are, how to open a
connection, how to read a database's state, and the Store that coordinates
writes. At 1240 lines the Store's own concerns — locks, migrations, vacuum,
tags — were hard to find among them.

Table records, Arrow schemas, index_specs, ensure_indexes, REQUIRED_TABLES
and query_to_pydantic move to store/schema.py, which imports nothing from
haiku.rag: it describes the tables and never opens or mutates one.

gather_database_info, get_database_stats, DatabaseInfo and its result models
move to store/info.py. Nothing in Store calls them — they are read paths for
the CLI, doctor, inspector and ingester API — so info depends on engine and
not the reverse.

engine.py keeps the Store, ConnectionMode, connect_lancedb, the tag helpers
and the restore-order and retention constants. No re-exports: importers
point at the new modules.

test_app_info_uses_connect_lancedb_for_remote patched
haiku.rag.store.engine.connect_lancedb; gather_database_info now binds that
name in info.py, so the patch targets where the call is looked up.
2026-08-20 12:13:51 +03:00

198 lines
6.7 KiB
Python

"""Table records, Arrow schemas and index specifications.
Describes what the tables are; nothing here opens a connection, mutates a
table, or imports a client layer.
"""
import logging
from typing import cast
from uuid import uuid4
import lancedb
import pyarrow as pa
from lancedb.index import FTS, Bitmap, BTree
from lancedb.pydantic import LanceModel, Vector
from lancedb.query import AsyncQueryBase
from pydantic import Field
logger = logging.getLogger(__name__)
async def query_to_pydantic[T: LanceModel](
query: "AsyncQueryBase", model: type[T]
) -> list[T]:
"""Typed wrapper around AsyncQueryBase.to_pydantic.
The upstream stub annotates `.to_pydantic()` as returning `list[LanceModel]`
regardless of the concrete model passed in. This helper narrows the return
type to the concrete model so attribute access on the results type-checks
at call sites without needing per-line cast / ignore comments.
"""
return cast("list[T]", await query.to_pydantic(model))
class DocumentRecord(LanceModel):
id: str = Field(default_factory=lambda: str(uuid4()))
content: str
docling_document: bytes | None = None
docling_pages: bytes | None = None
docling_version: str | None = None
class DocumentMetaRecord(LanceModel):
"""Mutable, lightweight document attributes, kept separate from the
write-once content/blobs in `documents`. Updating these (metadata, title,
source_revision) must not rewrite the multi-MB docling row."""
id: str
uri: str | None = None
title: str | None = None
metadata: str = Field(default="{}")
created_at: str = Field(default_factory=lambda: "")
updated_at: str = Field(default_factory=lambda: "")
def get_documents_arrow_schema() -> pa.Schema:
"""Generate Arrow schema for documents table with large_binary for docling_document.
LanceDB maps Python `bytes` to Arrow's `binary` type, which uses 32-bit offsets
and is limited to ~2GB per column in a fragment. When many large documents
(with embedded page images) are grouped in a single fragment, this limit is
exceeded, causing "byte array offset overflow" panics.
This function overrides the default mapping to use `large_binary` instead,
which has 64-bit offsets and no practical size limit.
"""
base_schema = DocumentRecord.to_arrow_schema()
large_binary_columns = {"docling_document", "docling_pages"}
fields = []
for field in base_schema:
if field.name in large_binary_columns:
fields.append(pa.field(field.name, pa.large_binary()))
else:
fields.append(field)
return pa.schema(fields)
class ChunkRecordBase(LanceModel):
"""Static base for ChunkRecord — declares the fields so attribute access
and constructor calls type-check. The concrete `vector` field is overridden
by create_chunk_model() with a Vector(dim) whose fixed-size-list dimension
is only known at runtime.
"""
id: str = Field(default_factory=lambda: str(uuid4()))
document_id: str
content: str
content_fts: str = Field(default="")
metadata: str = Field(default="{}")
order: int = Field(default=0)
vector: list[float] = Field(default_factory=list)
def create_chunk_model(vector_dim: int) -> type[ChunkRecordBase]:
"""Create a ChunkRecord model with the specified vector dimension."""
class ChunkRecord(ChunkRecordBase):
vector: Vector(vector_dim) = Field(default_factory=lambda: [0.0] * vector_dim) # type: ignore
return ChunkRecord
class DocumentItemRecord(LanceModel):
document_id: str
position: int
self_ref: str
label: str = Field(default="")
text: str = Field(default="")
page_numbers: str = Field(default="[]")
picture_data: bytes | None = None
heading_level: int = Field(default=0)
tree_depth: int = Field(default=0)
def get_document_items_arrow_schema() -> pa.Schema:
"""Generate Arrow schema for document_items with large_binary for picture_data.
LanceDB maps Python `bytes` to Arrow's `binary` type, which uses 32-bit offsets
and is limited to ~2GB per column in a fragment. Many embedded picture PNGs in
one fragment can exceed that limit. `large_binary` uses 64-bit offsets and has
no practical size limit — same reasoning as `docling_document` on the
documents table.
"""
base_schema = DocumentItemRecord.to_arrow_schema()
large_binary_columns = {"picture_data"}
fields = []
for field in base_schema:
if field.name in large_binary_columns:
fields.append(pa.field(field.name, pa.large_binary()))
else:
fields.append(field)
return pa.schema(fields)
def index_specs(table_name: str) -> list[tuple[str, Bitmap | BTree | FTS]]:
"""The index set each table carries."""
match table_name:
case "documents":
return [("id", BTree())]
case "document_meta":
return [("id", BTree()), ("uri", BTree())]
case "chunks":
return [
# Positions and stop words are required for phrase queries.
("content_fts", FTS(with_position=True, remove_stop_words=False)),
("id", BTree()),
("document_id", BTree()),
]
case "document_items":
return [
("document_id", BTree()),
("position", BTree()),
("self_ref", BTree()),
("label", Bitmap()),
]
case _:
return []
async def ensure_indexes(table: lancedb.AsyncTable, table_name: str) -> list[str]:
"""Create any declared index missing from a column. Returns the columns indexed.
Matches on index type, not column coverage, so a BTree does not satisfy a
declared Bitmap. Never drops or converts an index it did not declare.
Re-creating is not free: `create_index(replace=True)` rebuilds.
"""
covering: dict[str, set[str]] = {}
for index in await table.list_indices():
for column in index.columns:
covering.setdefault(column, set()).add(index.index_type)
applied: list[str] = []
for column, config in index_specs(table_name):
declared = type(config).__name__
present = covering.get(column, set())
if declared in present:
continue
if present:
logger.info(
f"Adding {declared} index on {table_name}.{column}, which carries "
f"{', '.join(sorted(present))}"
)
await table.create_index(column, config=config, replace=True)
applied.append(column)
return applied
class SettingsRecord(LanceModel):
id: str = Field(default="settings")
settings: str = Field(default="{}")
REQUIRED_TABLES: tuple[str, ...] = (
"documents",
"document_meta",
"chunks",
"document_items",
"settings",
)