Commit graph

151 commits

Author SHA1 Message Date
Yiorgis Gozadinos
7ba78fdde3
Normalize pragma comments to the codebase's single-line form 2026-07-26 20:18:19 +03:00
Yiorgis Gozadinos
f6acb65e95
Reach and enforce 100% coverage
Cover the remaining paths in the client, context, downloads, title
generation, document tools and store models, and add fail_under=100 so
uncovered lines fail CI.

Six lines that no test can reach get a pragma with its reason: the docling
import guard, the nameless PDF attachment, the FS symlink OSError guard that
resolve(strict=False) absorbs, the docling bbox and LanceDB document-id
shape guards, the tag-retention branch vacuum makes unreachable, and Monty's
Rust-thread print callback.

Fix test_find_config_file_user_config, which wrote its config into the cwd it
had chdir'd to, so the cwd branch answered first and the user-directory
lookup it names was never exercised.
2026-07-26 20:11:02 +03:00
Yiorgis Gozadinos
dddaf0f84c
Remove unreachable code and fix two defects it surfaced
Delete repository methods with no callers (SettingsRepository CRUD,
ChunkRepository.update/delete/get_chunks_in_range), the DataFrame branch of
_process_search_results whose only caller always passes a query, and guards
that cannot be reached from their call sites: the rebuild mode=None default,
the staging drop already performed by _resolve_rebuild_recovery, the empty
batch skip, two context fast paths, the doctor prefix guard, the poller
_task attribute that is never assigned, and a docling caption fallback for
a field name no item class defines.

set_haiku_version built a recreated settings row from the process-global
Config rather than the store's own, so a store opened with a custom config
stamped global settings into the database.

check_source_accessible called urlparse outside its try block, so a stored
URI with a malformed IPv6 host raised ValueError instead of reporting the
source as inaccessible, aborting the whole rebuild sweep.
2026-07-26 18:45:48 +03:00
Yiorgis Gozadinos
9deb1f2bd4
replace haiku.skills with native Pydantic AI capabilities 2026-07-24 15:26:17 +03:00
Yiorgis Gozadinos
75a21c82c2
Search results and citations carry document metadata 2026-07-23 10:23:48 +03:00
Yiorgis Gozadinos
f02cde5ddf
Fix same-tick cancellation losing recovery results in _wait_protected 2026-07-16 13:11:35 +03:00
Yiorgis Gozadinos
dd2817ff6d
Protect tag-creation cleanup from cancellation 2026-07-16 13:11:35 +03:00
Yiorgis Gozadinos
1f88944ada
Protect restore rollback from cancellation; report delete_tag listing failures 2026-07-16 13:11:34 +03:00
Yiorgis Gozadinos
f41ec379df
Add Store.restore_tag 2026-07-16 13:11:34 +03:00
Yiorgis Gozadinos
a1f3435df3
Vacuum suppresses OSError only 2026-07-16 13:11:34 +03:00
Yiorgis Gozadinos
f997d7adc9
Consolidate tag primitives 2026-07-16 13:11:34 +03:00
Yiorgis Gozadinos
0e271eaf4b
Remove --before/--at time travel 2026-07-16 13:11:33 +03:00
Yiorgis Gozadinos
0813a1c980
Add tag CLI commands and history tag annotations 2026-07-16 13:11:27 +03:00
Yiorgis Gozadinos
0cbde6b7a2
Serialize tag operations, vacuum, and metadata refresh with writes 2026-07-16 12:32:57 +03:00
Yiorgis Gozadinos
69319c9390
Grow vacuum retention to protect tagged versions 2026-07-16 12:32:57 +03:00
Yiorgis Gozadinos
ae603d9b4d
Add database-level tag primitives to Store 2026-07-16 12:32:56 +03:00
Yiorgis Gozadinos
aa620aeb60
Bump lancedb to 0.34.0 2026-07-16 12:32:56 +03:00
Yiorgis Gozadinos
995d081aa1
Visualize the exact context the model saw via Citation.doc_item_refs
visualize_chunk re-expanded chunks from scratch to recover their refs,
which could not faithfully reproduce the original merge, scores, and
clip — so a visualization could highlight different pages than the
citation covered. Carry the cited items on Citation.doc_item_refs and
resolve bounding boxes from them directly; re-expansion remains only as
the fallback for callers with no stored context (CLI, inspector). Chat,
inspector, the app endpoint, and the frontend pass the refs through.
2026-07-09 11:51:37 +03:00
Yiorgis Gozadinos
0bcf34363a
Carry merged chunk ids on SearchResult and Citation 2026-07-09 11:05:41 +03:00
Yiorgis Gozadinos
a1cf405cae
Rename document_meta identity column document_id to id 2026-07-08 16:32:55 +03:00
Yiorgis Gozadinos
d2593304c5
Attach figure bytes when a result matches its caption 2026-07-03 13:22:02 +03:00
Yiorgis Gozadinos
b61134b747
Log FTS index build failures at WARNING 2026-06-25 13:00:29 +03:00
Yiorgis Gozadinos
9f4dda9254
Reuse one MarkdownDocSerializer per document in item extraction 2026-06-24 12:02:13 +03:00
Yiorgis Gozadinos
2b2b475279
Collapse docling compression to a single function 2026-06-24 10:43:27 +03:00
bryan davis
e95ac2e25d
remove redundant serialization 2026-06-24 10:42:58 +03:00
Yiorgis Gozadinos
62d2326933
Use single-threaded zstd compressor 2026-06-24 10:08:25 +03:00
bryan davis
2ca12c0096
adjust zstd handling to avoid possible core dumps with concurrency 2026-06-23 15:26:33 -05:00
Yiorgis Gozadinos
885e7b7ce7
coverage 2026-06-12 10:17:19 +03:00
Yiorgis Gozadinos
bfc51b8b28
urface document_meta in info, history, and the inspector 2026-06-12 10:17:18 +03:00
Yiorgis Gozadinos
df8af54298
rebase from main 2026-06-12 10:17:18 +03:00
Yiorgis Gozadinos
3366a6d383
Split meta document attributes into a document_meta table 2026-06-12 10:17:17 +03:00
Yiorgis Gozadinos
4bc52f0710
Serialize multi-table document writes and bound update version churn 2026-06-12 10:16:39 +03:00
Yiorgis Gozadinos
0be2e5b24f
Extract gather_database_info shared by the info command 2026-06-09 11:09:28 +03:00
Yiorgis Gozadinos
b43843f862
Batch-capable document and document-item repositories 2026-06-09 10:01:20 +03:00
Yiorgis Gozadinos
213569601b
Stop rewriting stored embedding settings on database open 2026-06-05 10:35:50 +03:00
Yiorgis Gozadinos
b6bbea3d64
Stop writing the schema version on database open 2026-06-05 10:32:30 +03:00
Yiorgis Gozadinos
083ff401d5
vacuum db after migration 2026-05-26 11:44:47 +03:00
Yiorgis Gozadinos
ef9cacf981
Harden FS source against symlink escape; surface pool/poller liveness in /health, additional auth tests 2026-05-26 11:44:47 +03:00
Yiorgis Gozadinos
5affe70eae
Cover unparseable-metadata path 2026-05-26 11:44:47 +03:00
Yiorgis Gozadinos
c2f681dd78
constant-time auth, migration short-circuit 2026-05-26 11:44:46 +03:00
Yiorgis Gozadinos
13cbadeb6f
canonical metadata keys: source_revision + content_type, bump to 0.50.0 2026-05-26 11:43:30 +03:00
Yiorgis Gozadinos
260b8e8b09
Merge pull request #382 from ggozad/chore/updates
Prepare for pydantic-ai 2.0, update haiku.skills
2026-05-21 14:30:55 +03:00
Yiorgis Gozadinos
80e3ae0280
clean up deprecation warnings: docling annotations + haiku.skills 0.17.1 2026-05-21 13:45:40 +03:00
Yiorgis Gozadinos
d14bf88096
fix migration failures on pre-v0.48.0 document_items schemas 2026-05-21 10:53:21 +03:00
Yiorgis Gozadinos
8c57a3ca99
Drop the multi-agent research workflow 2026-05-20 12:46:48 +03:00
Yiorgis Gozadinos
04eeec77d2
per-doc lazy items/toc cache; index document_items for fast per-doc lookup 2026-05-20 10:08:25 +03:00
Yiorgis Gozadinos
e8c61ad0c6
items.jsonl exposes chunk_ids per row; drops position and tree_depth 2026-05-19 14:20:11 +03:00
Yiorgis Gozadinos
87c551c892
Cover 0.48.0 migration 2026-05-18 16:49:44 +03:00
Yiorgis Gozadinos
3b6bef3bfb
Rename get_captions_for_chunk() to get_text_for_refs() 2026-05-18 16:49:44 +03:00
Yiorgis Gozadinos
514b0c51f8
surface figure captions in search results, lower search.limit to 5 2026-05-18 16:49:43 +03:00