Commit graph

46 commits

Author SHA1 Message Date
Yiorgis Gozadinos
82fe91bb76
Order cross-database fusion by retrieval score
Rank interleaving guarantees every database slots regardless of content;
on domain-split collections it allocates no better than chance and costs
4.7pp recall@5 at four collections against score ordering (7.1pp at
eight). Hybrid scores are each database's own vector/FTS rank agreement,
which carries across databases; equal scores resolve by within-database
rank, and only a tie on both falls to configured order, leaving
permutation sensitivity at 0.02-0.26pp. Fused results carry the
candidate's own retrieval score, so the context-expansion re-sort
preserves fused order.
2026-09-01 15:26:41 +03:00
Yiorgis Gozadinos
c0cf612d68
Document vector index state and measured cost
Benchmarks state that every published number is exact brute-force kNN;
no benchmark database carries a vector index. The Vector Indexing
section gains the measured with/without IVF_PQ comparison (hotpotqa,
orb_multimodal_nemotron, frames: free to ~121k chunks, 0.0044 MAP at
426k, ~30 s / 4 GB build) and corrects the re-indexing story: optimize()
folds new chunks into the index as delta parts via auto_vacuum, so a
rebuild is about retraining centroids, not covering new rows.
2026-09-01 15:19:13 +03:00
Yiorgis Gozadinos
35f8d721b1
Build the chunks FTS index on the first write instead of at table creation
An FTS index built over an empty table indexes nothing and lance never
catches it up on add. ensure_indexes skips FTS while the table is
empty; create, replace_for_document and embed-only rebuild ensure
indexes after writing, so the index always covers at least its first
rows. The first write into a fresh table writes one extra chunks table
version for the index build; a failed build fails the write.
2026-08-31 18:42:31 +03:00
icearia0219
b93270adce Honor configured vector metric during search 2026-08-31 21:38:00 +08:00
Yiorgis Gozadinos
09a7076b7e
State what the code does, not what it replaced
Comments and docstrings across the branch narrated rejected
alternatives, consequences and history; each now states the current
contract. Renames test_a_legacy_uri_client_keeps_its_error to
test_an_unnamed_database_keeps_its_error. Documents the Sandbox
connection paths, the citation header's database segment, both
AmbiguousDatabaseError conditions on create_app, and run_inspector's
scope parameter. Doc paragraphs added by the branch in python.md,
storage.md and cli.md are one physical line each.
2026-08-28 15:13:52 +03:00
Yiorgis Gozadinos
ee835b77c2
Select a filtered document from the database that holds it
The chat filter modal keys a selection by (database, id): copies of a
database share document ids, and checking one copy left the other
reading as selected. Applying the filter narrows the question's
`sources` to the databases the selection names. A twin id inside
another selected database still matches there: a serialized id filter
cannot carry a source.
2026-08-28 15:12:55 +03:00
Yiorgis Gozadinos
590719fca7
Read a document, chunk or picture from the database that names it
`resolve_document` and `find_document` selected a document through a listing,
then dropped its source and looked the id up across the set. Ids repeat between
copies of a database, so a title that matched in one could be answered by
another's document.

`get_document_by_id` and `get_chunk_by_id` join `get_picture_bytes` in taking an
optional `source`, and all three route it through `clients_covering`, so a name
the client does not cover raises `UnknownDatabaseError` rather than being
answered by the database it does cover. Without a source the reads are as they
were, answering from the first database in configured order that holds the id.
2026-08-28 13:30:05 +03:00
Yiorgis Gozadinos
249c51c65a
Document which failure a database that will not open raises
Four passages said every missing database raises `FileNotFoundError` and that
errors show locations. A database named in `lancedb.databases` raises
`SourceUnavailableError` instead, naming the database and not its location,
which is the point of naming them. A path you gave keeps `FileNotFoundError` and
still shows the path.
2026-08-28 09:15:26 +03:00
Yiorgis Gozadinos
4d7fdd2d26
Record what the multi-database work changes, and what it measured
`--db-name` selects one database, not a subset: it is not repeatable.

The reranker recommendation was one-sided. It reports both measured effects now:
stronger aggregate retrieval across shards, and weaker attribution between
near-identical documents, where fusion keeps twins apart because each database
contributes its own top-ranked result.

Image queries are vector-only and skip the reranker.

The changelog described components of the new feature as fixes to the last
release. They are one Added entry, and the changes a user upgrading does see —
`settings` printing YAML, the document filter paging and searching, `list`
printing only the fields a document has — are listed.
2026-08-27 18:04:28 +03:00
Yiorgis Gozadinos
87367759f9
Say what makes a cited chunk id ambiguous
The documented rule was existence in more than one selected database. The rule
is narrower and does not need to be wider: a copy the search never returned
grounded nothing, so the retrieved result is the citation and its database is
recorded rather than guessed.

The page now states the whole rule, including the fallback's own check for an
id no search returned. Two retrieved copies are refused, and so is an id
already cited from another database in the conversation. The case between them
had no test.
2026-08-27 14:09:01 +03:00
Yiorgis Gozadinos
206d29b74a
Let the configuration place the ingester's database
The ingester manufactured `data_dir / haiku.rag.lancedb` whenever `--db` was
absent and passed it to HaikuRAG. A path is now an explicit override that
clears the configured URI, so a `lancedb.uri` deployment wrote to local disk
while the control plane reported on the remote.

`IngesterApp` resolves the databases it works on once, in its constructor, and
both the client it opens and the control plane read that scope. `--db` names
one directly and nothing stands in for it, so a configured set is refused
rather than guessed, and `AmbiguousDatabaseError` joins the errors `cli()`
turns into a clean exit.
2026-08-27 14:00:21 +03:00
Yiorgis Gozadinos
0d7810c78a
Render collection identity only for multi-collection searches
`format_for_agent` named the database whenever one was named, so a search over
a single named database carried a line with nothing to distinguish. It now takes
`include_collection` from the caller, which decides from the search selection
rather than from the hits: a search that could have drawn on two collections
names them even when everything came back from one.

`Collection:` at the model boundary, database in configuration and
administration. `source` on results, documents, citations and analysis
dictionaries is unchanged.
2026-08-27 12:41:05 +03:00
Yiorgis Gozadinos
746b663a2f
Correct the multi-database prose
`resolve_citations` documented the behaviour it now rejects: a shared chunk id
resolving to whichever result came last.

The storage page ran two embedding checks together as if the second explained
the first. They are separate: each database against the configuration on open,
and the databases in a selection against each other, which raises in read-only
mode too and does not apply to full-text search.

`several` becomes `multiple` where it names the feature, matching the docs and
`covers_multiple`.
2026-08-27 11:40:52 +03:00
Yiorgis Gozadinos
8ed24d0e24
Tighten the multi-database documentation
Restructure the storage page into search and provenance, duplicate ids,
ranking, Python operations and CLI commands, and state each in reference
voice. `Several Databases` becomes `Multiple Databases`, with the anchor
carried through every referrer, and the instruction files follow the same
name. Example databases are `papers`, `wiki` and `notes`.

`AmbiguousCitationError` is raised for a cited chunk id held by more than one
selected database, not for any shared id.
2026-08-26 17:23:02 +03:00
Yiorgis Gozadinos
db5f61d740
Rename the database selector to --db-name
`--database` and `--db` read as one word abbreviated but take different
things, a configured name against a filesystem path, and they sit in
different positions: `haiku-rag --db /path info` fails with `No such option`.
The CLI already says "database" to the user everywhere it prints one, so the
name it selects by should say the same. Unreleased, so no deprecation.

Also: without a reranker, raise `search.limit` with the number of databases
searched, since each contributes its best matches to a list truncated back
to the limit.
2026-08-26 16:48:27 +03:00
Yiorgis Gozadinos
8f41d42ab2
Correct what the client and the docs claim
`HaikuRAG.__init__` said an omitted `db_path` uses `storage.data_dir`, which
is the last of three; and that `sources` is ignored for a single `uri`, where
it raises, since only `lancedb.databases` names databases.

The name is not the only identity leaving the configuration: results,
citations, model input and errors opening a named database carry it, while
`info`, `init` and `tag` print the location. `sources=[]` returns no search
results, but `ask` and `analyze` still answer, without evidence.

Trim the comments that still narrated a failure or an alternative to the
invariant they were there for.
2026-08-26 16:47:59 +03:00
Yiorgis Gozadinos
2000098e16
Say which commands cover a set, and what a shared id does
Three groups, not two: `search`, `ask`, `analyze` and `chat` cover the set,
`settings`, `init-config` and `download-models` open no database, and every
other command works on one — or on a configured set of one, which is
unambiguous and keeps its name. A database named in `lancedb.databases` keeps
that name whether or not it is the only one covered; only `lancedb.uri` places
one without naming it.

Document ids repeat between copies of a database, where the sandbox refuses a
duplicate but the chat filter's `id IN (...)` matches the document in every
copy. `build_document_id_filter` claimed ids never widen a selection.

Document the facade: `covers_multiple`, `source_names`, `source`,
`reader_for`, `clients_for`, the lifetime of a borrowed client, and
`sources=None` against `sources=[]`.

Drop the vision callout from the README, which the features list already
covers.
2026-08-26 13:03:58 +03:00
Yiorgis Gozadinos
5b420a9b23
Take a schemeless lancedb.uri as a local path
Closes #582. `lancedb.databases` entries already classify a location by
whether it carries a scheme; `lancedb.uri` was taken as a URI whatever it
said, so a local path was opened as object storage and a mistyped one
became a new empty database instead of failing. Both settings now place a
database the same way, and `--db PATH` overrides either.
2026-08-26 12:20:09 +03:00
Yiorgis Gozadinos
d9ac221ca0
Refuse a chunk id that names a chunk in two databases
A chunk id is unique within a database and says nothing across them, so a
database copied from another holds the same ids. `qualified_id` keys the
two in-memory identity sites on the database and the id together:
`merge_results` was dropping the second database's result when a query
repeated, and the arrival map that breaks fused score ties was ranking one
of the pair as the other.

Everything serialized records the id alone, so there ambiguity is refused
rather than qualified. `resolve_citations` raises `AmbiguousCitationError`
for a cited id held by two of the databases searched, where it used to
resolve to whichever result came last; `_register_citations` raises for one
already cited from another database in an earlier question. `_cite` turns
both into a `ModelRetry` asking for other evidence. The direct-id fallback
asks every database the question covers instead of taking the first that
answers, so an id no search returned is refused on the same terms.
`all_found` collects them and `first_found` reads its first, which document
reads keep doing on purpose.

Also drop a duplicated 0.77.0 heading from the changelog.
2026-08-25 17:38:25 +03:00
Yiorgis Gozadinos
9fefcdb629
Refuse to create a database without naming one
`create=True` had nothing to act on across a set and was accepted anyway,
leaving the first query to fail on whichever database was missing.
2026-08-24 15:36:09 +03:00
Yiorgis Gozadinos
bddb32b469
Build the embedder for a set from configuration
An embedder is a function of configuration, not of a database, and the
databases in a selection share one, so a client covering a set builds it
on first use and closes it on teardown. Operations that need one database
say so instead of surfacing a missing store.
2026-08-24 15:28:21 +03:00
Yiorgis Gozadinos
a9e66b001b
Drop the database name from single-database document output
Naming one database on the command line points the configuration at it,
so no command that prints a document ever has a name to print.
2026-08-24 15:28:21 +03:00
Yiorgis Gozadinos
c3182d0fb6
Require one embedder across databases searched together
Searching a set embeds the query once, so a database written with another
model answers from a different vector space.
2026-08-24 15:27:59 +03:00
Yiorgis Gozadinos
e94623ec37
Tell a document which database it came from
Document.source names the configured database, as SearchResult and
Citation already do. A listing spanning databases is unreadable
without it, and `--database NAME list` could not name the one it
opened.
2026-08-24 10:03:47 +03:00
Yiorgis Gozadinos
e1fd68e8cb
Say that searching several databases wants a reranker
Reciprocal rank fusion compares ranks, so every database contributes its
own best matches whether or not they answer the question, and results from
databases holding nothing relevant displace better ones. Measured on one
corpus split three ways over 3,045 queries: retrieval MAP 0.6044 without a
reranker against 0.9798 for the same corpus in a single database, and
0.9918 against 0.9914 with one.
2026-08-24 10:03:47 +03:00
Yiorgis Gozadinos
bb92ccf67e
Cover the configured set in the chat TUI
Chat answers with the same capabilities `ask` does, so it federates as
naturally as `ask` and `analyze` — but it went through the one-database
guard and refused a configured set outright, which left no way to chat
across several databases.

The guard was the visible half. `run_chat` also defaulted `db_path` to the
single default path whenever it was None, so lifting the refusal alone
would still have opened one database. It now leaves the path unresolved
when `lancedb.databases` names the set, and the client resolves it.

Listing and counting documents fan out over the set, which is what the
document filter reads, and visual grounding resolves the database holding
the cited chunk through the citation's source: chunks, pages and bounding
boxes all come from that one database. A limit on a listing means that
many documents in total, not that many per database.

The info modal reports every database it covers, each under its
configured name and without its location, since names are the only
identity that leaves the configuration. `database_lines` is what one
database reports about itself, shared by both paths, and it reports a
failure as a line so one unreachable database does not cost the report on
the others.

`inspect` stays a one-database command. It browses one database's
documents and chunks, so a set has nothing to show it.
2026-08-24 10:03:46 +03:00
Yiorgis Gozadinos
e15f73a387
Document searching several databases
lancedb.databases, the sources argument and the --database selector had no
documentation. Adds a Several Databases section to the storage
configuration page covering the name-to-location map, its mutual
exclusion with uri, the shared embedding configuration the set requires,
and which commands cover the set against which work on one. Adds a
Searching Several Databases section to the Python API page, --database to
the CLI's global options, the key to the sample configuration, and one
README feature line.
2026-08-24 10:03:46 +03:00
Yiorgis Gozadinos
483c0ec354
Give the docs an architecture page and one extras list
overview.md repeated the landing page: the same install-and-ask block and
five of six identical links. It was positioning prose, where the docs had no
page describing how the system works.

Rewrite it as Architecture, following the data through: source adapter,
converter, chunker, embedder, transaction; then storage and its versioning;
then retrieval, with the 10x rerank fetch and section-bounded expansion; then
the two capabilities; then laptop versus ingester. Retitled in the nav and on
the landing page, filename kept so existing links resolve.

Extras were listed in three places and none was complete.
docs/installation.md now carries a table of all fifteen slim extras, what each
provides, and which the full package already includes.
haiku_rag_slim/README.md names them and links there. The claim that other
providers need their own pydantic-ai extra was wrong: haiku.rag-slim defines
anthropic, google, groq, mistral, bedrock and vertexai itself.

configuration/storage.md opens with the four operational constraints, which
were either buried in an S3 section or undocumented: one writer per URI,
reader lag by read_consistency_interval_seconds, migrate after a
schema-changing upgrade, and the fixed embedding dimension with what
ConfigMismatchError means and which rebuild mode resolves it.

The one-writer rule is stated as a haiku.rag constraint, which is what it is:
the multi-table lock, version snapshot and rollback are process-local, so a
second writer can commit inside another's transaction and be reverted by its
rollback. storage.md and ingester.md both claimed it was a LanceDB property
that corrupts manifests. The S3 deployment section now links to the
constraint instead of restating it.

Get started reads index, Quickstart, Installation, Architecture. The landing
page's list was missing Installation.
2026-08-20 15:07:06 +03:00
Yiorgis Gozadinos
6f976ef2a9
Share the LanceDB session across connections
Every `Store` built its own connection with its own caches and discarded them on
close, so the index a vector query loads was refetched by the next connection.
On object storage that first fetch dominates: measured on a ~500k-chunk 2560-dim
corpus over a ~200ms link, the first query cost ~41s and the second ~3s, and a
new connection reusing the session cost ~7s instead of ~47s.

`connect_lancedb` now passes a process-wide session, keyed on the configured
cache sizes so a caller asking for different sizes gets its own.

Also sets `read_consistency_interval`, defaulting to 30s. It was None, meaning a
connection never re-checked for other processes' writes. Per-call connections hid
that; a shared session makes connections long-lived enough for a reader to go
stale against the ingester.

All three settings reject negatives at the config boundary. A negative cache size
raises OverflowError and a negative interval panics inside Lance, so neither is
catchable further in. Zero stays valid for both: no cache, and check on every
read.

The routing tests now assert the kwargs they care about rather than the full call
signature, since every connection carries the two new kwargs.
2026-08-18 14:58:17 +03:00
Yiorgis Gozadinos
749752820c
Document vacuum memory requirements 2026-07-30 14:32:40 +03:00
Yiorgis Gozadinos
6c04dd5881
docs 2026-06-12 10:17:18 +03:00
Yiorgis Gozadinos
7ea61a7b10
drop the old monitor, rename serve→mcp, add e2e tests 2026-05-26 11:42:41 +03:00
Yiorgis Gozadinos
0ee00334c7
drop prose emdashes and semicolons; minor fixes 2026-05-20 14:27:16 +03:00
Yiorgis Gozadinos
19e2be003e
docs: add chat page, restructure nav, reorder sections 2026-05-20 14:27:16 +03:00
Yiorgis Gozadinos
8c57a3ca99
Drop the multi-agent research workflow 2026-05-20 12:46:48 +03:00
Yiorgis Gozadinos
6f6ebf27c8
Document s3 storage & monitoring 2026-05-11 11:29:56 +03:00
Yiorgis Gozadinos
ff8ad0879c
fix context expansion: respect section boundaries, remove max_context_items 2026-04-20 15:18:16 +03:00
Yiorgis Gozadinos
b6113bf8ab
replace fixed-radius expansion with section-bounded algorithm
Context expansion is now automatic and structure-aware. For structured
documents, expands within the section containing the match. For sections
that exceed the budget or are too small, expands item-by-item outward
skipping noise labels. Unstructured documents use budget-based outward
expansion. Results sorted by relevance score.
2026-04-16 12:11:53 +03:00
Yiorgis Gozadinos
367accb814
Replace MinIO with SeaweedFS for S3 integration tests 2026-04-08 14:19:32 +03:00
Yiorgis Gozadinos
5e7a4ebae5
Update docs 2026-04-08 14:19:32 +03:00
Yiorgis Gozadinos
8206498af8
Documentation updates 2025-12-10 13:02:49 +02:00
Yiorgis Gozadinos
2161727716
Add auto_vacuum config option to control automatic vacuuming 2025-12-10 11:42:14 +02:00
Yiorgis Gozadinos
52acdcb56a
Update docs, include tuning document 2025-12-09 12:55:28 +02:00
Yiorgis Gozadinos
802f058205
Move search related config under SearchConfig 2025-12-09 12:28:28 +02:00
Yiorgis Gozadinos
4da50873bd
Make search limit configurable 2025-12-09 11:46:43 +02:00
Yiorgis Gozadinos
5612ecaee7
Fix documentation configuration index 2025-11-26 10:24:53 +02:00
Renamed from docs/storage.md (Browse further)