Commit graph

39 commits

Author SHA1 Message Date
Yiorgis Gozadinos
4967765878
Delete comments that restate the line below them
Sixty-three comments said what the next statement already said: # Connect to
LanceDB above connect_lancedb, # Path object above isinstance(source, Path),
# Get page numbers from provenance above the prov loop, # Clear and populate
results above list_view.clear(). They cost a read and carry nothing.

The line is whether a comment restates one statement or labels a phase. Phase
labels stay: the migrations keep # Create staging table with new schema and
# Copy from staging to final table in batches, each heading ten lines of a
long procedure. So do comments carrying a fact the code cannot: the
merge_insert update-only note on document_meta, why the poller builds sources
eagerly, why create_document_from_source returns a list for directories, that
indexes need training data, the field-group markers in the config models, and
the file:// URL-encoding note in create_document_from_source.

capabilities/ is untouched. Its docstrings sit next to prompt surface, and
changing them needs an eval to back it.

The cassette-recording docs were wrong three ways. They named
tests/test_qa.py::test_qa_anthropic, which no longer exists; they targeted
whole modules, so a rewrite would re-record cassettes for services the
recorder is not running; and they used COHERE_API_KEY where the SDK reads
CO_API_KEY. docs/development.md now names exact tests with -n0, and the keyed
example is test_cohere_reranker, which owns the one cassette recording
api.cohere.com.
2026-08-20 15:22:33 +03:00
Yiorgis Gozadinos
629e1ba4ea
Split the store module by responsibility
engine.py held four unrelated things: what the tables are, how to open a
connection, how to read a database's state, and the Store that coordinates
writes. At 1240 lines the Store's own concerns — locks, migrations, vacuum,
tags — were hard to find among them.

Table records, Arrow schemas, index_specs, ensure_indexes, REQUIRED_TABLES
and query_to_pydantic move to store/schema.py, which imports nothing from
haiku.rag: it describes the tables and never opens or mutates one.

gather_database_info, get_database_stats, DatabaseInfo and its result models
move to store/info.py. Nothing in Store calls them — they are read paths for
the CLI, doctor, inspector and ingester API — so info depends on engine and
not the reverse.

engine.py keeps the Store, ConnectionMode, connect_lancedb, the tag helpers
and the restore-order and retention constants. No re-exports: importers
point at the new modules.

test_app_info_uses_connect_lancedb_for_remote patched
haiku.rag.store.engine.connect_lancedb; gather_database_info now binds that
name in info.py, so the patch targets where the call is looked up.
2026-08-20 12:13:51 +03:00
Yiorgis Gozadinos
895b5f0532
Refresh source-backed documents in place on a FULL rebuild
FULL rebuild deleted a document before re-ingesting it from its URI, and
the handler around that logged and continued. A 404, a timeout or any
conversion error therefore removed the document permanently.

Deleting after a successful create is not an alternative:
create_document_from_source resolves the same URI to the existing
document and updates it in place, so a trailing delete would remove the
freshly rebuilt row.

Refresh in place instead. create_document_from_source takes an internal
force flag that skips the revision and MD5 short-circuits, so an
unchanged source is still re-converted, re-chunked and re-embedded into
the existing document, and the document id survives a rebuild.

A failed refresh now falls through to the stored-content path rather
than skipping the document: FULL recreates the chunks table before the
loop, so skipping left the document present but unsearchable until the
next rebuild.

The pending-batch flush moves out of the try. A failed flush is a lost
write and should abort the rebuild, not be logged and skipped.
2026-08-19 13:06:39 +03:00
Yiorgis Gozadinos
eb11a165b8
Stop loading page rasters on the title and update paths 2026-08-06 13:04:51 +03:00
Yiorgis Gozadinos
ac9b2cbf81
Load document blobs only when asked 2026-08-06 13:04:51 +03:00
Yiorgis Gozadinos
f96a428ef1
Fix defects found reviewing the coverage work
check_source_accessible narrowed its handler to ValueError, but Path.exists
re-raises errno values outside its ignored set (EACCES, ENAMETOOLONG). Those
were swallowed before and now escaped into the rebuild sweep the guard exists
to protect. Catch OSError too.

Restore the arity guard in _common_path_prefix: without it an empty list
raises from min() and a single label yields a prefix covering the whole path.

Two tests would have hung rather than failed on regression (the vacuum skip
and the protected-wait cancellation); both are now bounded. The import
vacuum test raced against the done-callback that discards the task, and now
spies on the call instead, with a negative control.

Replace assertions that could not fail: blank-query search against an empty
corpus, a batch flush counted against an empty table, a picture description
asserting its own input state, and an FS scheme check with nothing on disk to
resolve. The get_model matrix asserted only the returned type across 26
cases and now pins the per-provider settings. The three batching tests now
count flushes, which revealed embed-only writes through chunks_table.add
rather than _flush_rebuild_batch.
2026-07-27 10:44:32 +03:00
Yiorgis Gozadinos
dddaf0f84c
Remove unreachable code and fix two defects it surfaced
Delete repository methods with no callers (SettingsRepository CRUD,
ChunkRepository.update/delete/get_chunks_in_range), the DataFrame branch of
_process_search_results whose only caller always passes a query, and guards
that cannot be reached from their call sites: the rebuild mode=None default,
the staging drop already performed by _resolve_rebuild_recovery, the empty
batch skip, two context fast paths, the doctor prefix guard, the poller
_task attribute that is never assigned, and a docling caption fallback for
a field name no item class defines.

set_haiku_version built a recreated settings row from the process-global
Config rather than the store's own, so a store opened with a custom config
stamped global settings into the database.

check_source_accessible called urlparse outside its try block, so a stored
URI with a malformed IPv6 host raised ValueError instead of reporting the
source as inaccessible, aborting the whole rebuild sweep.
2026-07-26 18:45:48 +03:00
Yiorgis Gozadinos
0813a1c980
Add tag CLI commands and history tag annotations 2026-07-16 13:11:27 +03:00
Yiorgis Gozadinos
a1cf405cae
Rename document_meta identity column document_id to id 2026-07-08 16:32:55 +03:00
Yiorgis Gozadinos
2b2b475279
Collapse docling compression to a single function 2026-06-24 10:43:27 +03:00
Yiorgis Gozadinos
775dc58b53
Drop redundant _apply_descriptions_sync unit test, annotate the helper 2026-06-23 09:14:36 +03:00
Chris McDonough
cee9484f35 Fix import sort order 2026-06-22 13:49:59 -04:00
Chris McDonough
d160080ff8 Move lazy imports to module scope 2026-06-22 13:48:09 -04:00
Chris McDonough
97748c2fee Fix import sorting lint error 2026-06-22 13:46:21 -04:00
Chris McDonough
22b4397148 Thread compress_docling_split in rebuild.py off the asyncio event loop
Extracts pydantic serialization and zstd compression into a sync
helper and wraps it with asyncio.to_thread so picture description
rebuilds don't block the event loop.

Fixes #457.
2026-06-22 13:42:40 -04:00
Yiorgis Gozadinos
3366a6d383
Split meta document attributes into a document_meta table 2026-06-12 10:17:17 +03:00
Yiorgis Gozadinos
0e3d53791f
Add rebuild --set-embedder to reconcile embedder identity 2026-06-05 10:42:15 +03:00
Yiorgis Gozadinos
651b22ddcf
Fix rebuild --embed-only corrupting picture embeddings 2026-06-03 11:46:43 +03:00
Yiorgis Gozadinos
e7c7df2915
Always use the Store-owned embedder 2026-05-29 11:36:53 +03:00
Yiorgis Gozadinos
04415a9d09
bump pydantic-monty, refresh deps, cap transformers<5 2026-05-18 16:02:55 +03:00
Yiorgis Gozadinos
dbb87e091f
Ensure schema parity for _StagingChunkRecord 2026-05-14 15:11:18 +03:00
Yiorgis Gozadinos
849eca94d0
Make rebuild --embed-only idempotent across crashes 2026-05-14 15:02:12 +03:00
Yiorgis Gozadinos
a035b0f9e4
Stream rebuild --embed-only through a staging table to bound memory 2026-05-14 15:02:12 +03:00
Yiorgis Gozadinos
a98ddc14b8
Replace picture_description.enabled with processing.pictures enum 2026-05-13 16:22:44 +03:00
Yiorgis Gozadinos
387032511e
Simplify 2026-05-08 12:11:25 +03:00
Yiorgis Gozadinos
e55e3d13c8
fix _patch_picture_descriptions silently dropping docling_pages 2026-05-06 12:57:41 +03:00
Yiorgis Gozadinos
ffc7b95375
yield per document during rebuild for live progress reporting 2026-05-05 14:04:37 +03:00
Yiorgis Gozadinos
dca3188a48
hydrate documents lazily during rebuild 2026-05-05 12:47:45 +03:00
Yiorgis Gozadinos
ff82d36c2f
add rebuild --descriptions: run VLM over stored picture bytes only 2026-05-05 12:02:46 +03:00
Yiorgis Gozadinos
e88321767d
always store picture bytes; collapse converter to a single zip path 2026-05-05 10:40:40 +03:00
Yiorgis Gozadinos
c9227c649f
emit synthetic picture chunks at ingest under multimodal embedders.
processing.chunk() merges text chunks with one synthetic Chunk per PictureItem-with-bytes,
sorted by iterate_items() position so chunk.order is structural.
embed_chunks dispatches on a Chunk._picture_data PrivateAttr
(text through embed_documents, picture through embed_image_query)
2026-05-03 17:04:43 +03:00
Yiorgis Gozadinos
875c635a77
have rebuild --rechunk re-chunk from the stored docling blob instead of re-converting from the markdown export 2026-04-30 15:30:24 +03:00
Yiorgis Gozadinos
7831057339
add processing.pictures enum (none|description|image), replacing the implicit pair of generate_picture_images+picture_description.enabled flags 2026-04-30 14:26:14 +03:00
Yiorgis Gozadinos
6a77ce92a9
extract picture bytes to document_items.picture_data at ingest, strip them from the docling_document blob, and add 0.45.0 migration to backfill existing
databases
2026-04-30 11:26:37 +03:00
Yiorgis Gozadinos
729899299b
Log post-rebuild vacuum failures and clarify vacuum-await scope 2026-04-24 15:31:36 +03:00
Yiorgis Gozadinos
258ffa41fa
Improve test coverage 2026-04-24 14:43:59 +03:00
Yiorgis Gozadinos
aca3ccc29f
Close connections if __aenter__ fails mid-initialization 2026-04-24 14:43:59 +03:00
Yiorgis Gozadinos
3224d1f20c
Extract document orchestration into client/documents.py 2026-04-24 14:43:59 +03:00
Yiorgis Gozadinos
cb02a2c3d8
Extract rebuild machinery into client/rebuild.py 2026-04-24 14:43:59 +03:00